Gene BR1401 details

Gene Information

• Locus tag: BR1401
• Symbol: tcaB
• ID: 1167083
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Brucella suis 1330
• Kingdom: Bacteria
• Replicon accession: NC_004310
• Strand: -
• Start bp: 1354772
• End bp: 1355983
• Gene Length: 1212 bp
• Protein Length: 403 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637330341
• Product: Bcr/CflA subfamily drug resistance transporter
• Protein accession: NP_698399
• Protein GI: 23502272
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG2814] Arabinose efflux permease
• TIGRFAM ID: [TIGR00710] drug resistance transporter, Bcr/CflA subfamily; [TIGR00880] Multidrug resistance protein

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTTCCA GTCTTGTGCG CAATGCCATT GTTCTTGGCC TTCTTTCGGC CATCGGTCCT 
TTTGCGATTG ATATGTATCT ACCGGCCCTG CCGACCATTG CCACCGATCT GCGGGCGGAA 
ACCGGCGCGG TGCAGATGAG CCTGCTCGCC TTCTTTCTGG CACTGGCGCT GGCGCAGCTT 
TTCTGCGGGC CCCTGTCCGA TATGGTCGGG CGTAAACTGC CGCTTTATGG CGGGCTGGTG 
CTCTTCGCCA TAGGCAGCAT CGGTTCGGCG CTTGCGGCCA ATATCGACGT GCTGGTGCTG 
TTCCGTTTCG TCCAGGGATT GGGGGCTGCG GCAGGCATGG TGATACCGCG CGCCATCGTG 
CGCGATCTTC ATATGGGTGT CGAGGCCGCG CGCCTTATGT CGCTTTTGAT GCTGGTCTTT 
TCGATTTCGC CGATTCTGGC CCCGCTGACT GGCTCCATCA TCATAAGCTT TTTCGGCTGG 
CGCGGGGTTT TCTGGGCCGT GTTGCTTGCC GCCGGCATCG GCATCATACT GGTTGCGACC 
GCGCAGAAGG AAACGCGCAG CGTCGAGGCG CGGCTTGAGA GCAATATCAG CATCGCATTG 
CGCGGTTACG GGCGGCTGTT GAAGGACCGT CATTTCCTCG GCCTCGTCTT CGTGGGCGGT 
TTCGGTCTTG CGTCCTTGTT CGTTTATCTG GCGAATTCCG CCTTCGTGCT GATCGACCAT 
TATGGCCTGA CACCGATACA ATATGCCGTG GCATTTTCCG TCAATGCCGT GTCGTTCTTC 
GGCGTTTCGC AGCTCAACGG CTGGCTTGGC GCGCGTTTCG GCCTTGGCCG GGTGATGCGC 
TTTGCTGCTT GCGGCTTTGC CGCAGCAATG CTTGCCATGT TCGCGGCGGC GCTGATGGGG 
CATCAATCAC TCTGGCTGGT CGCAAGCTTC CTCTTTGTCG GTTACGGCTT CCTTGGGCTG 
GTTATTCCAG CTACGGCGGT GCTGGCGCTC GAAGAACACG GCGAGATTGC CGGAACGGCA 
TCTGCATTGA TGGGCACGCT TCACTTCGTC ATTGGTGGCG TGGCGATTGG TATTGTCGGA 
GCCTATTCCG ATGGCACGGC GCTGCCGATG ATTGGCGGCA TCACCGGCTG TGCGCTGGCG 
GCGTTCGTGC TGGCGCAGAT CGTCCTTGCC CGCAAGTCGA GAAAGCGCGG CAGAGCAACG 
GCGGCAGCCT GA 

 

Protein sequence

MASSLVRNAI VLGLLSAIGP FAIDMYLPAL PTIATDLRAE TGAVQMSLLA FFLALALAQL 
FCGPLSDMVG RKLPLYGGLV LFAIGSIGSA LAANIDVLVL FRFVQGLGAA AGMVIPRAIV 
RDLHMGVEAA RLMSLLMLVF SISPILAPLT GSIIISFFGW RGVFWAVLLA AGIGIILVAT 
AQKETRSVEA RLESNISIAL RGYGRLLKDR HFLGLVFVGG FGLASLFVYL ANSAFVLIDH 
YGLTPIQYAV AFSVNAVSFF GVSQLNGWLG ARFGLGRVMR FAACGFAAAM LAMFAAALMG 
HQSLWLVASF LFVGYGFLGL VIPATAVLAL EEHGEIAGTA SALMGTLHFV IGGVAIGIVG 
AYSDGTALPM IGGITGCALA AFVLAQIVLA RKSRKRGRAT AAA