Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BR1396 |
Symbol | hflC |
ID | 1167078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Brucella suis 1330 |
Kingdom | Bacteria |
Replicon accession | NC_004310 |
Strand | - |
Start bp | 1350297 |
End bp | 1351199 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637330336 |
Product | hflC protein |
Protein accession | NP_698394 |
Protein GI | 23502267 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | [TIGR01932] HflC protein |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.685975 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCAGA ACAGGCTCCC GATCATTGTC GGCTTCATTG CCGTCATCGC TTTCCTGCTC TATTCCTCCG TGTTCATCGT GACCGAACGC CAGCAGGCTA TCGTTCTGCG TTTCGGCCAG ATCGTGGATG TGAAGACGAA GCCGGGCATC TATTTCAAGC TGCCTTTCAG CTTTATGGAT GCCGATACGG TGCAGATGGT CGATGACCGC CTGCTGCGTT TCGACCTCGA CGATATCCGT GTGCAGGTTT CCGGCGGCAA GTTCTACGAT GTGGATGCTT TCCTCGTCTA TCGCATCACG GATGCCCGCA AGTTCCGCGA AACGGTTTCC GGCAGCACGC TTCTCGCCGA ACAGCGCCTG CGTACCCGTC TCGATGCGGC TCTGCGCAGT GTTTACGGCC AGCGTGGCTT CGAGGCCGCT TTGTCGGAAG AGCGCGGCGA TATGATGCGT GAAGTGCGCG ACCAGCTTCG CCCCGATGCG ACATCGCTTG GCCTGACCAT CGCCGATGTT CGTATCCGCC GGACCGATCT TACGACGGAA GTATCGCAGC AGACCTATGA CCGTATGAAG GCGGAACGCC TGGCGGAAGC GGAACGCCTG CGGGCGCGTG GCCGCGAAGC GGCGCAGCGG ATCCGCGCTG TCGCGGATCG TCAGGTTGTG GAAACGCTTG CCGAAGCGCG CAAGGAATCG GAAATCCTTC GCGGTGAGGG CGATGCCCAG CGCAGCGAGA TCTTCGCCAA ATCCGCATCG GAAGATCCGG GCTTCTTCGC CTTCTACCGT TCGATGGCGG CTTATCGTCG GGCGCTGGAA ACGCCGGATA CCACGCTTGT CCTCTCGCCG GATTCGGAGT TCTTCAAGTT CTTCCGTGAT GCCGGTGGCA AGCTGGCAAC GCCGAGCCAA TAA
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Protein sequence | MTQNRLPIIV GFIAVIAFLL YSSVFIVTER QQAIVLRFGQ IVDVKTKPGI YFKLPFSFMD ADTVQMVDDR LLRFDLDDIR VQVSGGKFYD VDAFLVYRIT DARKFRETVS GSTLLAEQRL RTRLDAALRS VYGQRGFEAA LSEERGDMMR EVRDQLRPDA TSLGLTIADV RIRRTDLTTE VSQQTYDRMK AERLAEAERL RARGREAAQR IRAVADRQVV ETLAEARKES EILRGEGDAQ RSEIFAKSAS EDPGFFAFYR SMAAYRRALE TPDTTLVLSP DSEFFKFFRD AGGKLATPSQ
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