| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BR1242 |
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| Symbol | rpoC |
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| ID | 1166918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Brucella suis 1330 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004310 |
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| Strand | - |
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| Start bp | 1205970 |
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| End bp | 1210172 |
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| Gene Length | 4203 bp |
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| Protein Length | 1400 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637330182 |
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| Product | DNA-directed RNA polymerase subunit beta' |
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| Protein accession | NP_698246 |
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| Protein GI | 23502119 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCAAG AGGTCATGAA TCTTTTCAAT CCTCAGGCTC CGGCGCAAAC GTTCGATTCC
ATCAGAATCT CGATCGCCAG CCCTGAGAAG ATTCTGTCCT GGTCATACGG CGAGATCAAG
AAGCCGGAGA CGATCAACTA CCGTACGTTC AAGCCAGAAC GCGATGGTCT CTTCTGCGCG
CGCATCTTCG GCCCGATCAA GGACTATGAA TGCTTGTGCG GCAAGTACAA GCGTATGAAA
TACAAGGGCA TCATCTGCGA AAAATGCGGC GTAGAAGTCA CGCTTTCCCG CGTTCGCCGC
GAGCGCATGG GCCATATCGA ACTTGCAGCA CCGGTTGCGC ATATCTGGTT CCTGAAGTCG
CTGCCAAGCC GCATCGGCAC GCTTCTGGAC ATGACGCTCA AGGATATCGA GCGCGTCCTG
TACTTTGAAA ACTACATCGT CACCGAACCC GGCCTGACCT CGCTGAAGGA GCACCAGCTT
CTGTCAGAAG AGGAATATAT GATCGCCGTC GATGAATTCG GCGAAGATCA GTTCACGGCG
CTCATCGGGG CGGAAGCGAT CTACGAACTG CTGGCTTCGA TGGAACTTGA AAAGATCGCT
GCGGACCTGC GCGTCGATCT GGCCGAGACC ACTTCGGACC TGAAGCAGAA GAAGCTGATG
AAGCGTCTGA AGATCGTCGA GAACTTCCTG GAGTCGGGAA ACCGCCCGGA ATGGATGATC
ATGAAGATCG TTCCGGTGAT CCCGCCGGAT CTGCGCCCGC TCGTGCCGCT GGATGGCGGT
CGTTTTGCGA CGTCGGATCT CAACGATCTC TATCGCCGCG TCATCAACCG TAACAACCGT
CTGAAGCGCC TGATCGAACT GCGCGCGCCG GGCATCATCA TCCGCAACGA AAAGCGCATG
TTGCAGGAAG CTGTCGATGC GCTGTTCGAC AACGGCCGTC GCGGCCGCGT CATCACCGGT
GCCAACAAGC GCCCGCTGAA GTCGCTGTCC GACATGCTCA AGGGCAAGCA GGGCCGCTTC
CGTCAGAACC TGCTCGGCAA GCGCGTGGAC TATTCAGGCC GTTCGGTCAT CGTGACCGGC
CCGGAACTGA AGCTGCACCA GTGCGGCCTG CCGAAGAAGA TGGCGCTCGA ACTGTTCAAG
CCGTTCATCT ATGCGCGTCT TGACGCCAAG GGCTATTCGT CCACCGTCAA GCAGGCGAAG
AAGCTGGTTG AAAAGGAACG CCCGGAAGTC TGGGATATCC TTGACGAAGT GATCCGCGAG
CATCCGGTTC TTCTGAACCG TGCCCCGACG CTGCACCGTC TCGGCATCCA GGCGTTTGAA
CCGACCCTGA TCGAAGGCAA GGCCATTCAG CTTCATCCGC TCGTCTGCAC GGCGTTCAAT
GCCGACTTCG ACGGCGACCA GATGGCTGTT CACGTTCCGC TTTCGCTTGA AGCCCAGCTT
GAAGCGCGCG TGCTGATGAT GTCGACCAAC AACATCCTGC ATCCGGCCAA CGGCGCACCG
ATCATCGTTC CGTCACAGGA TATGGTTCTC GGCCTCTATT ATCTGTCCAT CGTGGCGGAG
AAGGAGCCGG GCGAGGGCAT GATATTCGCC GATATGGGCG AGCTACAACA TGCGCTTGAA
AACAAGGTCG TCACGCTGCA CACCAAGATC AAGGGCCGTT TCAAGACGGT CGATGCCGAA
GGCAACCCTG TGTCGAAGAT TTACGACACG ACGCCGGGCC GCATGATCAT GGGTGAATTG
CTGCCGAAGA ACGTCAACGT TCCGTTCGAT ATCTGCAATC AGGAGATGAC CAAGAAGAAC
ATCTCCAAGA TGATCGACCA TGTTTACCGC CATTGCGGCC AGAAAGAGAC GGTTATCTTC
TGTGACCGCA TCATGCAGCT TGGTTTTGCC CATGCTTGCC GTGCGGGTAT CTCCTTCGGC
AAGGATGACA TGGTCATCCC GGAATCGAAG GCCAAGATCG TTGCGGAAAC CGAAGCGCTT
ACGACCGAAT ACGAACAGCA GTACAATGAC GGCCTGATTA CGCAGGGCGA AAAGTACAAC
AAGGTCGTTG ACGCCTGGGG CAAGGCAACC GACAAGATCA CCGAAGAGAT GATGGCGCGC
CTGAAGGCCG TCGAATTCGA TCCGGTGACC GGTCGCCAGA AGCAGATGAA CTCGGTCTAC
ATGATGTCGC ATTCGGGTGC CCGTGGTTCG GTCAACCAGA TGCGCCAGCT TGGCGGCATG
CGCGGCCTGA TGGCCAAGCC GTCGGGTGAA ATCATCGAGA CCCCGATCAT CTCGAACTTC
AAGGAAGGCC TGACCGTGAA CGAGTACTTC AACTCGACCC ACGGCGCCCG CAAGGGTCTG
GCAGACACCG CCTTGAAGAC GGCCAACTCG GGCTACCTGA CCCGTCGTCT CGTTGACGTT
GCACAGGATG CGATTATTTC GGAAGTCGAT TGCGGCGCCG AAATCGGTCT CACCATGCAG
CCCATCGTCG ATGCCGGCCA GATCGTCGCC TCGATCGGCC AGCGCGTTCT GGGCCGTACG
GCTCTCGATC CGATCCTGCA TCCGGTAACC GGCGAAGTCA TCGTCGAGGC TGGCCGCATG
ATCGAGGAGA AGGACGTCGA GATCATCGAG AAGGCTGGCA TCCAGTCGAT TCGCATCCGT
TCGGCCCTCA CCTGTGAAAC CCGCGACGGC GTTTGCGCCA AGTGCTATGG CCGCGACCTT
GCACGCGGCA CGCCGGTCAA CCAGGGTGAA GCTGTCGGCG TTATCGCCGC TCAGTCGATC
GGCGAGCCGG GCACCCAGCT CACCATGCGT ACCTTCCACT TGGGCGGTAC CGCACAGGTG
GTCGACAGCT CCTATCTTGA AGCTTCGTAT GAAGGCACCG TCAAGCTGCG CAACCGCAAT
GTGGTTCGCA ACTCCGATGG CAACCTCGTG GTGATGGGCC GTAACATGGC TGTCCTGATC
CTCGACGCTA CGGGCAAGGA ACGTGCGGTC CATCGCGTGA CCTATGGTTC GCGTCTGTTC
GTGGACGAGG GCGATACGGT CAAGCGCGGC CAGCGCATTG CCGAGTGGGA TCCGTATACC
CGTCCGATCA TGACGGAAGT TGAAGGCTAC GTTGAGTTTG AAGATCTCGT CGATGGTCTG
TCGGTTTCGG AAACGGCCGA CGAGTCGACT GGTATCACCA AGCGCGTTGT CATCGACTGG
CGTTCGACCC CGCGCGGTTC GGATCTCAAG CCTGCCATGG TCATCAAGGA CAAGGCCGGC
AAGATCCTGA AACTGTCGAA GGGTGGCGAT GCCCGCTTCC TGCTCTCCGT GGAATCGATC
CTTTCGGTTG AGCCGGGCGC GCATGTGAAG GCTGGCGACG TTATCGCCCG TCTGCCGATG
GAAAGCGCCA AGACCAAGGA CATCACCGGT GGTCTGCCGC GCGTGGCTGA ACTGTTTGAA
GCTCGCCGTC CGAAGGACCA CGCCATCATC GCCGAGATCG ATGGTACCGT CCGTTTCGGT
CGCGACTACA AGAACAAGCG CCGCATCATT ATCGAGCCGA ACGACGATAC GATCGAGCCG
GTTGAGTATC TCATTCCGAA GGGCAAGCCG TTCCATCTTC AGGACGGTGA CGTCATCGAA
AAGGGTGAGT ATATCCTCGA CGGCAACCCG GCACCGCATG ACATTCTGGC GATCAAGGGC
GTGGAAGCTC TGGCTTCCTA CCTCGTGAAC GAAATCCAGG AAGTCTATCG CTTGCAGGGC
GTTTTGATCA ACGACAAGCA CATCGAAGTG ATCGTTCGCC AGATGTTGCA GAAGGTGGAA
ATCACGGAAT CCGGCGATAC CGGCTATATT CCGGGTGACC ACGTTGACCG CATCGAGCTG
GAAGAGATCA ACGAACGTCT TATCGAAGAA GGCAAGAAGC CGGGCTCCGG CAATCCTGTC
CTCCTCGGTA TCACCAAGGC TTCGCTGCAG ACGCCTTCGT TCATCTCGGC CGCGTCGTTC
CAGGAAACGA CCCGTGTGCT GACCGAAGCT GCGGTTGCCG GTAAGATGGA CACGTTGCAG
GGTCTCAAGG AAAACGTCAT CGTCGGCCGT CTCATCCCGG CCGGTACTGG CGGCATGACC
AACCAGATCC GTCGCATCGC AACCGCGCGC GACGAACTGA TTATCGACGA ACGTCGCAAG
ACTTCCGGTT CGGCCGAAGC AAATGCGATG CTGGTTGATA TGACCAACAA CGCTGCCGAA
TAA
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| Protein sequence | MNQEVMNLFN PQAPAQTFDS IRISIASPEK ILSWSYGEIK KPETINYRTF KPERDGLFCA
RIFGPIKDYE CLCGKYKRMK YKGIICEKCG VEVTLSRVRR ERMGHIELAA PVAHIWFLKS
LPSRIGTLLD MTLKDIERVL YFENYIVTEP GLTSLKEHQL LSEEEYMIAV DEFGEDQFTA
LIGAEAIYEL LASMELEKIA ADLRVDLAET TSDLKQKKLM KRLKIVENFL ESGNRPEWMI
MKIVPVIPPD LRPLVPLDGG RFATSDLNDL YRRVINRNNR LKRLIELRAP GIIIRNEKRM
LQEAVDALFD NGRRGRVITG ANKRPLKSLS DMLKGKQGRF RQNLLGKRVD YSGRSVIVTG
PELKLHQCGL PKKMALELFK PFIYARLDAK GYSSTVKQAK KLVEKERPEV WDILDEVIRE
HPVLLNRAPT LHRLGIQAFE PTLIEGKAIQ LHPLVCTAFN ADFDGDQMAV HVPLSLEAQL
EARVLMMSTN NILHPANGAP IIVPSQDMVL GLYYLSIVAE KEPGEGMIFA DMGELQHALE
NKVVTLHTKI KGRFKTVDAE GNPVSKIYDT TPGRMIMGEL LPKNVNVPFD ICNQEMTKKN
ISKMIDHVYR HCGQKETVIF CDRIMQLGFA HACRAGISFG KDDMVIPESK AKIVAETEAL
TTEYEQQYND GLITQGEKYN KVVDAWGKAT DKITEEMMAR LKAVEFDPVT GRQKQMNSVY
MMSHSGARGS VNQMRQLGGM RGLMAKPSGE IIETPIISNF KEGLTVNEYF NSTHGARKGL
ADTALKTANS GYLTRRLVDV AQDAIISEVD CGAEIGLTMQ PIVDAGQIVA SIGQRVLGRT
ALDPILHPVT GEVIVEAGRM IEEKDVEIIE KAGIQSIRIR SALTCETRDG VCAKCYGRDL
ARGTPVNQGE AVGVIAAQSI GEPGTQLTMR TFHLGGTAQV VDSSYLEASY EGTVKLRNRN
VVRNSDGNLV VMGRNMAVLI LDATGKERAV HRVTYGSRLF VDEGDTVKRG QRIAEWDPYT
RPIMTEVEGY VEFEDLVDGL SVSETADEST GITKRVVIDW RSTPRGSDLK PAMVIKDKAG
KILKLSKGGD ARFLLSVESI LSVEPGAHVK AGDVIARLPM ESAKTKDITG GLPRVAELFE
ARRPKDHAII AEIDGTVRFG RDYKNKRRII IEPNDDTIEP VEYLIPKGKP FHLQDGDVIE
KGEYILDGNP APHDILAIKG VEALASYLVN EIQEVYRLQG VLINDKHIEV IVRQMLQKVE
ITESGDTGYI PGDHVDRIEL EEINERLIEE GKKPGSGNPV LLGITKASLQ TPSFISAASF
QETTRVLTEA AVAGKMDTLQ GLKENVIVGR LIPAGTGGMT NQIRRIATAR DELIIDERRK
TSGSAEANAM LVDMTNNAAE
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