Gene BR1216 details

Gene Information

• Locus tag: BR1216
• Symbol: rpsE
• ID: 1166892
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Brucella suis 1330
• Kingdom: Bacteria
• Replicon accession: NC_004310
• Strand: -
• Start bp: 1192003
• End bp: 1192563
• Gene Length: 561 bp
• Protein Length: 186 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637330156
• Product: 30S ribosomal protein S5
• Protein accession: NP_698220
• Protein GI: 23502093
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0098] Ribosomal protein S5
• TIGRFAM ID: [TIGR01021] ribosomal protein S5, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCACAGA GAGAACGTAA CCGCGAAGAG CGCGGCCGTG AGGAGCGCGA CAGCGAATTC 
GTCGATAAGC TCGTTCACAT CAACCGTGTT GCCAAGGTCG TCAAGGGCGG CCGTCGCTTC 
GGTTTTGCTG CGCTCGTCGT TGTTGGCGAC CAGAAGGGCC GCGTGGGCTT CGGTCATGGC 
AAGGCACGTG AAGTGCCGGA AGCTATCCGT AAGGCGACCG AAGCTGCCAA GCGCGACATG 
ATCTTCGTAC CGCTGCGTTC GGGCCGTACG CTGCATCACG ACGTCGAAGG CCGTCACGGC 
GCTGGCAAGG TTCTGCTTCG CGCAGCCCCT GCCGGTAAGG GTATCATCGC CGGTGGTCCG 
ATGCGTGCAG TGTTTGAAAC GCTCGGCGTT CAGGACGTTG TCGCCAAGTC GCTCGGTTCG 
TCGAACCCTT ACAACATGGT TCGTGCGACG TTCGATGCTC TGAAGCATCA GATGCATCCG 
AAGGACATCG CTGCACAGCG CGGTATCAAG TACTCGACCC TTCAGGCTCG CCGCCATGAT 
GTGGTCGGTT CGGAAGAATA G 

 

Protein sequence

MAQRERNREE RGREERDSEF VDKLVHINRV AKVVKGGRRF GFAALVVVGD QKGRVGFGHG 
KAREVPEAIR KATEAAKRDM IFVPLRSGRT LHHDVEGRHG AGKVLLRAAP AGKGIIAGGP 
MRAVFETLGV QDVVAKSLGS SNPYNMVRAT FDALKHQMHP KDIAAQRGIK YSTLQARRHD 
VVGSEE