Gene BR1192 details

Gene Information

• Locus tag: BR1192
• ID: 1166868
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Brucella suis 1330
• Kingdom: Bacteria
• Replicon accession: NC_004310
• Strand: -
• Start bp: 1167610
• End bp: 1169658
• Gene Length: 2049 bp
• Protein Length: 682 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 637330132
• Product: hypothetical protein
• Protein accession: NP_698196
• Protein GI: 23502069
• COG category: [R] General function prediction only
• COG ID: [COG4666] TRAP-type uncharacterized transport system, fused permease components
• TIGRFAM ID: [TIGR02123] TRAP transporter, 4TM/12TM fusion protein

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAGAAG AACAAAATGC AAAGCTTGCG CCGATGGAAC TCGATGAGGT CAAGGCGAGG 
GAGCTTGAAG AAAAATTCGA TTCTGAAATC CGCTTCCGCC CGCTGGCGCC AGTGGCTGCC 
CGCATTGTCG GGACTTTGCT GATAATTCTG TCTCTTTTCC ATTATTATAC GGCAGGCTTC 
GGTCTCTTGC CGGAAATGAT CCATCGTGGC ATCCATCTAG CCTTCGTGCT GGGGCTGGTC 
TTTCTGGTCT TTCCCTTCTC ACGCAAGGGC TATGACGAAC CTGCAAAGCC GTCGCTGCTT 
CGCCCGCTTG GAATATCCGT TATCGATTGG GGGCTGGCGA TCATCGCCGT CGTGGCTGTC 
ATCCATGTGC CGCTGATCCC GCTTGACGAT CTCGCCTTCC GTGTCGGCAA TCCCACAAGC 
ACCGATGTCG TGCTGGGCAG CCTTTTGATC CTGATCCTGC TGGAAGCCAC GCGCCGTTCA 
GTCGGCTGGC CGCTGCCGAT CATTTCTGTC CTGTTCATGC TCTATGCGCT CTACGGGCCT 
TCCATGCCCG GCATTCTGGT GCATCCGGGG GCTACCGTCA GCCAGCTTGT GGATCATCTT 
TATCTCACGA CGCAGGGTAT TTATGGTATC GCGCTCGGCG TGGTCGCAAC CTATGTGTTC 
CATTTTGTGC TGTTTGGCGT TTTTGCTACG CGGATCGGCC TTGGCCAGCT TTTTCTCGAT 
TGTGCGGCCT GGGTTGCCGG ACGATTTGCC GGTGGCCCGG CCAAGGTTTC CATCTTCGGT 
TCGGCTCTGT TCGGCATGAT CTCCGGTTCT TCCGTCGCAA ATGCGGTGAC GGTCGGCTCG 
CTCACCATCC CGGCAATGAT CCGTCTCGGG TATAAGCGCC ATTTCGCGGC GGCTGTAGAA 
TCGGCTTCCT CGACCGGCGG TCAAATAACG CCGCCGATCA TGGGTGCTGC CGCATTCCTG 
ATGATCGAGT TTCTCAACCT TCCCTATACG ACGATCATTC TTGCGGCCAT CGTGCCCGCC 
TTTATGCACT TCTTCGGCGT TTTGATGCAG GTGCATTTCG AGGCCAAGCG CACCGGTTTG 
CGCGGCATGA CCAAGGAGGA GATGCCCGAT CTGAAAGAAG CCTTAAAGCG GGACTGGCCG 
ACCATTATTC CGCTGGTGGT GCTGATCGCC GTACTGCTTT CAGGCTATAC GCCTTATCTT 
GCCGCTTTCT GGGGGATTAC GCTGTGCATA GCGGTTGGCC TTCTCAATCC GCGCAAGCGC 
ATGACCATTG GCGAAGTGTT CGAGGGCCTG CGTGACGGTG CAAAATATGC GCTTGCCGTT 
GGTGCGGCCG CGGCTACGGT TGGCATTATC GTTGGCGTCG TAACGCTTAC CGGCGTTGGC 
TTTAAGATTT CCTATATCGT AACCTCCACA GCGGCGCAGC TTGCAACCTA TTTCGGTACG 
ATTTTGCCCG TAAGCTGGTT TGCACCGCAG ACGCTGACAC TTCTCTTCAC GCTCGTCATG 
ACAGGGATGG TCTGTATCCT GATGGGTTGC GGCATTCCGA CGACCGCCAA CTACATCATC 
ATGGCGACGA TTGCGGCCCC GGCGCTGGGC CTGCTCGGCG TGGAGCCGAT TGTCGCGCAT 
TTCTTCGTCT TCTATTATGG TGTTCTTGCG GATATCACGC CGCCGGTTGC GCTTGCCGCC 
TATGCGGCGG CGGGCATGGC GGGGGCCGAT CCGTTCAAGA CGGGCAACAC AGCCTTCCGG 
CTCGGTCTGG GCAAGGTGCT GGTGCCGTTC GTTTTCGTCT TCTCGCCATC GCTGCTGCTG 
GTGACGTCCA ACTTCAACTG GCCGGATTTC TTCATTGCCT TCTTCGGCTG CGTTATCGGC 
ATTACGGCGC TTGGCGCGGC ATTGTCCGGT TTCTTCCTGG TGCGGACGAA GATATGGGAA 
AATGTGCTTC TCATATTTGC GGCAATGCTT CTGGTCGCGC CAGAAATCTA TTCGTCTATC 
GTGGGTTTGA TTCTGTTGCT GCCAGTCGTC GTTCGTCATC TGGTGGCGTC GCGCCGGCCC 
GCCTACTGA 

 

Protein sequence

MTEEQNAKLA PMELDEVKAR ELEEKFDSEI RFRPLAPVAA RIVGTLLIIL SLFHYYTAGF 
GLLPEMIHRG IHLAFVLGLV FLVFPFSRKG YDEPAKPSLL RPLGISVIDW GLAIIAVVAV 
IHVPLIPLDD LAFRVGNPTS TDVVLGSLLI LILLEATRRS VGWPLPIISV LFMLYALYGP 
SMPGILVHPG ATVSQLVDHL YLTTQGIYGI ALGVVATYVF HFVLFGVFAT RIGLGQLFLD 
CAAWVAGRFA GGPAKVSIFG SALFGMISGS SVANAVTVGS LTIPAMIRLG YKRHFAAAVE 
SASSTGGQIT PPIMGAAAFL MIEFLNLPYT TIILAAIVPA FMHFFGVLMQ VHFEAKRTGL 
RGMTKEEMPD LKEALKRDWP TIIPLVVLIA VLLSGYTPYL AAFWGITLCI AVGLLNPRKR 
MTIGEVFEGL RDGAKYALAV GAAAATVGII VGVVTLTGVG FKISYIVTST AAQLATYFGT 
ILPVSWFAPQ TLTLLFTLVM TGMVCILMGC GIPTTANYII MATIAAPALG LLGVEPIVAH 
FFVFYYGVLA DITPPVALAA YAAAGMAGAD PFKTGNTAFR LGLGKVLVPF VFVFSPSLLL 
VTSNFNWPDF FIAFFGCVIG ITALGAALSG FFLVRTKIWE NVLLIFAAML LVAPEIYSSI 
VGLILLLPVV VRHLVASRRP AY