| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BR1154 |
|---|
| Symbol | |
|---|
| ID | 1166830 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brucella suis 1330 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004310 |
|---|
| Strand | - |
|---|
| Start bp | 1133323 |
|---|
| End bp | 1135668 |
|---|
| Gene Length | 2346 bp |
|---|
| Protein Length | 781 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637330095 |
|---|
| Product | surface antigen |
|---|
| Protein accession | NP_698159 |
|---|
| Protein GI | 23502032 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
|---|
| TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein
[TIGR03304] outer membrane insertion C-terminal signal |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.108315 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCAA GTTCTAAATT CTTTGGCGCC GCTTCTGCGC TCGCCATGTC AGTGGCTCTT
GTGGCTTCGG GTACTGCTGG TTTCTCCTTG GCATCGGTCA GTGTGGCCGA GGCAGCCGTC
GTCAGCCGTA TCGAAGTGCG TGGCAATACA CGCGTCGATG CTCAGACGAT TCGCGATAAT
ATCGACATAA GGCCGGGCAA GGCCTTCACC AGCGCGGATA TCGATGCTGC GGTGAAGCGC
CTTTTTGCCA TGGGTCTGTT TTCCGATGTT CGCATCCACC AGTCCGGCAG CACGCTGATC
GTTCAGGTGG AAGAGCGTTC GGTGGTCAAC AATGTGCTGT TCCAGGGCAA TAAGAAGATC
AAGGATCCTG ATCTTGCACG TGCCGTGCAG CTCAAGCCGC GTGCGCCTTT CGATATGGCC
ACGATGGAAG CCGACAAGGA AGCGATCAAG GCTGCCTACT CCCATATCGG GCGCAGCGAT
GCGACTGTTA ACGCTCGCAC GGTCGATCTT GGTCAGGGCC GCGTGAATGT CGTTTACGAA
ATCAACGAAG GTTCGCGCAC CAAGATTGCC AATATTGAAT TTGTCGGCAA TCAGGCGTTT
AGCGGGCGCC GCCTGCGTGA CGTTATTTCC ACCAAGCGTT CAAATCCGCT TTCCTGGCTG
ACGCGTAACG ACGTTTATGA TGAAGGCCGC CTTCAGGCCG ACGAAGAAAC GCTGCGTCGC
TTCTATTACA ACCGCGGCTA TGCGGATTTC CGTGTGCTTT CGTCGAATGC GGTTCTCGAT
CCGTCGACGA ACGAATATAC GATCACGATC ACCGTGGATG AAGGTCCGCG TTATACTTTC
GGCGATGTAA GCGTGGAAAG CACCGTTGAT GGTGTCGATA CGCAGGCGCT TGATCGTCTG
GTCAAGACCC GTACGGGCAA GCCTTACAGC GCGAAGGAAA TCGAAGATTC GGTTCTCTCC
GTTACGGAGA GTGTTGCCGG CAGCGGTTAT GCCTTTGCAA AGGTTGAGCC GCGTGGTGAT
CGTAACTTTG AAAATCACAC GATTTCCGTG GTCTATAGTG TTGATCAGGG GCCGCGTGCC
TACATTCAGC GCATCGAAAT CCGTGGTAAC GACAAGACCC GCGATTATGT GATTCGTCGT
GAATTCGACC TGAACGAAGG CGATGCCTTC AATCAGGTCA TGGTGCAGCG CGCCAAGCGT
CGCCTTGAGG CGCTCGACTT CTTCCAGACG GTCAACATCT CGACCGCTCC GGGTTCCGAG
CCGGATCAGG TGATCCTGGT TGTCGATGTT GTCGAAAAGT CGACGGGTGA ATTCTCGATC
GGTGGCGGCT ATACGACCGG CGGTGAATCG CCGGGTGCAC AGGTTGAAGC GGCAATCACC
GAGCGCAACT TCCTTGGTCG CGGCCAGTAT ATTCGCATCA GCGCGGGTGC CGGTCAGGAC
GATATGCGCA ATTACGGCCT GTCGTTCACG GAGCCATATT TCCTTGGCTA TCGCCTCTCG
GCTGGCTTCG ACGTATTCCG CCGCTCATAT CGTGTGAATG ACGATTATGA TGTCGAGCAG
ACTGGCGGTA CGATCCGTTT CGGCCTGCCG ATCACGGACA ACTTCTCTGC TGGCATCGCG
TATAACCTGG TTCAGGAAAA GTATGACCTG TTCCGTGGCG ATGCAGAAAA TTATTACGCT
CCGGCGCTGC TGGAAGCTGC TGAAAACAGC CCGTGGCTCC GCTCGTCGGT CAGCTACTCG
CTGACCTATA GTTCCATCGA TGACATAAAG AACCCGCATG ATGGACTTTA TGGCAAGTTT
ATTCAGGAAT TCGCTGGTCT TGGTGGTGAT GCGAAATATG TGAAGACGAC CTTCAAGGGC
AACTACTACC AGACGCTGTC GCAGGAAGCG GATATCGTCG GTTTGCTGGG TGTCGGTGCC
GGTTATATTC ATGAATTCGG TGATGATGGC GTTCGCATCT TCGACCTGTT CAAGAACAGT
TCGGATATTA TTCGCGGCTT CAAGTTCAAC GGTATCGGCC CGTATCAGGA TGCCAAGAAC
GGCAAGCGTT ACTGGATGGG GGGAACCACC TATTTCAGCG GTACTGCTGA AGTTCAGTTC
CCGATGCCGG TCCTTCCTGA AAGCCTGGGT GTGCGTGGTG CATTCTTTGC CGACGCCGCT
ACGCTTTACG GCAATGATAC GCCAGACATT AGTGGCGACG ACAAGAAGCT TCGTGCTTCG
GTTGGCGTCA GCTTGATGTG GGCTTCACCG TTCGGTCCGT TGCGCTTTGA CTATGCATTC
CCTGTTGCAA AAGCTGATAC TGACAAGGTT CAGAACTTCA ACTTCGGTGT ATCGACAAAG
TTCTGA
|
|---|
| Protein sequence | MTASSKFFGA ASALAMSVAL VASGTAGFSL ASVSVAEAAV VSRIEVRGNT RVDAQTIRDN
IDIRPGKAFT SADIDAAVKR LFAMGLFSDV RIHQSGSTLI VQVEERSVVN NVLFQGNKKI
KDPDLARAVQ LKPRAPFDMA TMEADKEAIK AAYSHIGRSD ATVNARTVDL GQGRVNVVYE
INEGSRTKIA NIEFVGNQAF SGRRLRDVIS TKRSNPLSWL TRNDVYDEGR LQADEETLRR
FYYNRGYADF RVLSSNAVLD PSTNEYTITI TVDEGPRYTF GDVSVESTVD GVDTQALDRL
VKTRTGKPYS AKEIEDSVLS VTESVAGSGY AFAKVEPRGD RNFENHTISV VYSVDQGPRA
YIQRIEIRGN DKTRDYVIRR EFDLNEGDAF NQVMVQRAKR RLEALDFFQT VNISTAPGSE
PDQVILVVDV VEKSTGEFSI GGGYTTGGES PGAQVEAAIT ERNFLGRGQY IRISAGAGQD
DMRNYGLSFT EPYFLGYRLS AGFDVFRRSY RVNDDYDVEQ TGGTIRFGLP ITDNFSAGIA
YNLVQEKYDL FRGDAENYYA PALLEAAENS PWLRSSVSYS LTYSSIDDIK NPHDGLYGKF
IQEFAGLGGD AKYVKTTFKG NYYQTLSQEA DIVGLLGVGA GYIHEFGDDG VRIFDLFKNS
SDIIRGFKFN GIGPYQDAKN GKRYWMGGTT YFSGTAEVQF PMPVLPESLG VRGAFFADAA
TLYGNDTPDI SGDDKKLRAS VGVSLMWASP FGPLRFDYAF PVAKADTDKV QNFNFGVSTK
F
|
|---|
| |