Gene BR1108 details

Gene Information

• Locus tag: BR1108
• Symbol: clpX
• ID: 1166784
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Brucella suis 1330
• Kingdom: Bacteria
• Replicon accession: NC_004310
• Strand: -
• Start bp: 1083978
• End bp: 1085252
• Gene Length: 1275 bp
• Protein Length: 424 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 637330049
• Product: ATP-dependent protease ATP-binding subunit ClpX
• Protein accession: NP_698113
• Protein GI: 23501986
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1219] ATP-dependent protease Clp, ATPase subunit
• TIGRFAM ID: [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX)

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.41749
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCAAAG TCAGCAACGG CGGCGGCGAT TCCAAGAATA CGCTTTATTG CTCGTTCTGT 
GGCAAAAGCC AGCATGAAGT GCGCAAGCTG ATTGCAGGCC CGACCGTTTT CATCTGCGAC 
GAATGCGTCG AACTCTGCAT GGACATCATC CGTGAGGAAA ACAAATCCTC CATGGTGAAG 
TCGCGTGAGG GAGTGCCGAC GCCGCAGGAA ATCATGGCCG TCCTTGACGA TTACGTCATC 
GGCCAGAAGG ATGCCAAGCG CGTTCTGTCG GTTGCGGTTC ACAATCATTA CAAGCGTCTG 
GCGCATCAGT CCAAGAACAG CGATATCGAA CTGGCGAAGT CGAACATTCT GCTCGTCGGC 
CCGACGGGCT GCGGCAAGAC CTATCTTGCC CAGACGCTTG CCCGCATCAT CGATGTGCCG 
TTCATCATGG CGGATGCGAC GACGCTGACG GAAGCCGGCT ATGTCGGCGA AGATGTGGAG 
AACATCATCC TGAAGCTGCT TCAGGCCGCC GATTATAATG TGGAGCGCGC GCAGCGCGGC 
ATCGTCTATA TTGATGAAGT GGACAAGATC AGCCGCAAGT CGGACAATCC ATCCATTACC 
CGTGACGTAT CGGGCGAGGG TGTGCAGCAG GCCCTGCTGA AGATCATGGA AGGCACTGTC 
GCTTCCGTGC CGCCGCAGGG TGGGCGCAAG CATCCGCAGC AGGAATTCCT GCAGGTGGAT 
ACGACAAACA TCCTGTTTAT CTGCGGTGGT GCTTTTGCGG GTCTCGACCG TATCATTTCC 
GCTCGCGGCG AGAAGACCTC CATCGGCTTT GGCGCTACGG TCAAGTCCGT CGATGAGCGT 
CGTATCGGTG AAGTCTTCAA GGAACTGGAA CCGGAAGACC TGTTGAAATT CGGCCTGATT 
CCGGAATTTG TCGGTCGTCT GCCTGTCATC GCTACGCTCG AAGACCTCGA CGTCGATGCT 
CTGGTCCAGA TTCTGACCGA GCCGAAGAAT GCGCTCGTGA AGCAGTATCA GCGCCTGTTC 
GACATGGAAA ATGTCGAACT GGTGTTCCAT GACGATGCGT TGCGCGCGAT TGCCAACAAG 
GCTGTCGAAC ACAAGACGGG TGCACGCGGC CTGCGTTCGA TCATGGAAAA GATTCTGCTC 
GATACCATGT TTGAACTGCC GACGCTGGAA GGCGTTCGCG AAGTTGTGAT TTCGGGCGAT 
GTGGTGGATG GAAGCGCCCG CCCGCTATAC ATCTACGCCG AGCGGCAGGA CGAAAAGGGC 
AACGTTTCAG CCTGA 

 

Protein sequence

MSKVSNGGGD SKNTLYCSFC GKSQHEVRKL IAGPTVFICD ECVELCMDII REENKSSMVK 
SREGVPTPQE IMAVLDDYVI GQKDAKRVLS VAVHNHYKRL AHQSKNSDIE LAKSNILLVG 
PTGCGKTYLA QTLARIIDVP FIMADATTLT EAGYVGEDVE NIILKLLQAA DYNVERAQRG 
IVYIDEVDKI SRKSDNPSIT RDVSGEGVQQ ALLKIMEGTV ASVPPQGGRK HPQQEFLQVD 
TTNILFICGG AFAGLDRIIS ARGEKTSIGF GATVKSVDER RIGEVFKELE PEDLLKFGLI 
PEFVGRLPVI ATLEDLDVDA LVQILTEPKN ALVKQYQRLF DMENVELVFH DDALRAIANK 
AVEHKTGARG LRSIMEKILL DTMFELPTLE GVREVVISGD VVDGSARPLY IYAERQDEKG 
NVSA