| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BR1088 |
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| Symbol | |
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| ID | 1166764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Brucella suis 1330 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004310 |
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| Strand | - |
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| Start bp | 1060631 |
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| End bp | 1063720 |
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| Gene Length | 3090 bp |
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| Protein Length | 1029 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637330029 |
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| Product | AcrB/AcrD/AcrF multidrug efflux protein |
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| Protein accession | NP_698093 |
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| Protein GI | 23501966 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family
[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTTT CCGATATCTT CATCCGGCGC CCCGTGCTTG CCACGGTGGT TTCCCTCATG
ATCGTCCTTT TGGGCCTGCA GGGGATTGCG CAGCTTTCCG TGCGCGAATA TCCGAAGGTT
GATGAAACCG TCATCACCGT GACAACGGCC TATGCCGGTG CGAGCGCCGA TCTCATTCAG
GGCTTCATCA CTGCGCCCAT TGCGGAAGCG GTCGCAACAA CCGAAAACAT TGACTATGTA
ACCTCGTCCA GCCGTCCTTC GTCCAGTACT GTCACCGTGC AGATGAAGCT CGGCGCAGAC
CCGGATGCGG CGCTGACCGA GGTTATCGCG AAGGTCAATC AGGTTCGTGG CAATCTGCCC
GACGAATCCG ACGATCCTGT CATCGTCAAG GGAACGGGCC AGAGCTTTGC CACCATGTAT
CTGGCGGCGC AGAACCCCAA TATGACGAGT GAGCAGATCA CGGAATACCT AAAGCGCGTG
ATCCAGCCTC GTATGTCCAC CATTCAGGGT GTCGCCAAGG CGGAAATTCT CGGTGGGCAG
GTCTATTCGA TGCGTGTCTG GCTGGACCCG ATCCAGCTTG CCGCGCGCCA GATCACCGCG
CCGGAAGTTC TGTCCGCGAT CAAGGCCTCG AACTTCCTGT CTGCGCCGGG CAAGACCAAG
AACGAATATG TTGCGACATC GATCACGCTG AAGTCCACCT TGCAGACACC GGAAGCTTTC
GGGGCCATGC CTATCAAGGC GTTGGGCGAC GAAGTGGTGC GCCTGCGCGA TGTGGCAAAG
GTGGAGCTTG CGGCAGAAAG CACGGATACT ATCGTTTCGT TCAACGGTTC GGCCGGCACA
TTCCTCGGGG TCTATCCGAC ACCGGCGGCA AACCCCATCG ACATGGCGGC AGCCGTGCGC
AAGGAATTGC CATCCATTCA GGCATCGTTG CCGGAAGGCA TGTCGCTCGT CCTCGTTTAT
GACGCGACCG AGCAGATCAG TTCTTCGATC AACGAGGCGT TCACGACCAT TGGCGAAGCC
GTGGCCATCG TCATTCTGGT CATCATCGTC TTTCTCGGCT CGTTCCGCTC GGTGCTCATC
CCGATTGTCA CGATCCCGAT CTCGCTGATC GGCGTGTGCT TTTTCCTTTA TGTGCTGGGC
TTTTCGATCA ATCTCCTGTC ACTGCTTGCC ATGGTGCTCG CTATCGGCCT TGTGGTGGAT
GACGCGATCG TGGTGCTGGA GAATATCCAC CGGCATATCG AGGAAGGCTT GCACCCCATC
GATGCGGCCT TCAAGGGGAT GAAGGAAATT ACCGGCTCGA TTGTCGCAAT GACGATCACG
CTGGCGGCAG TGTTTACGCC GCTCGGATTT ATCGGCGGCC TGACGGGTTC TCTGTTCCGC
GAATTCGCCT TCACGCTGGC GGGCGCGGTC ATTATATCCG GTATCGCTGC TTTGACGATT
TCGCCGATGA TGTGTTCGCG CATGTTGAAG CATGGCGACC AGACCCGGTT CCAGAAGTTT
ATCGACCGCA CCTTTTCGCG CTTCGAGAAG TGGTATCATG CGCGCGTTTC CAACTCCCTG
AACTATCGCT GGATCACGCT GGCAATTGTC TTGTGCCTCA TGGGGCTGAC GGGCTTCCTG
TTCATGAACA CGTCCAGCGA GCTTGCACCT GAAGAAGATT CGGGCGCACT GTTTTCCATG
TTTCAGGCCC CGCAATATGC GACGTCGGCC TATACCAATC TCTATGCCGA GCAGATTGAT
GCGCTGACCA AGGATCTGCC CGAGCAGAAA ACTCGGTTCC AGATCGTTGG CATGGACGGC
GGCACGACTT CGGGCATCGC GCTCTGGGTT TTGAAAGACT GGAATGAGCG TGACCGTTCG
CAAAAGCAAA TCCAGCAAGA CCTGACCGCG CGTATCTCCA AGGTTGCAGG CGTGCAGGCC
TTCATCTTCG CGCCTCCATC CCTGCCGGGG ACAGGTGGCG GCCTGCCGAT CTCGATAGCG
CTGCAATCGA CCGGCCCTGC CGATCAGGTG TTTGCGCTTG CCGAAGAGAT CAAGGCCGAA
GCACAGGCTT CAGGCCAGTT CATTATCGTG CAGAATTCGC TCTCCTTCAA CGCGCCGCAG
ACCACGATCA CGATTGACCG TGACTGTGCG GCGACGCTTG GCGTGCAGGT GAGCGATATC
GGTTCGACAC TCGGTCTTTT GACCGGCGGC GCATCGATTG CCAAGTTCGA CCGCGATTCC
AACAGCTACG ATATCATCAC ACAGGTGCCG GATTCCTACC GCGCCAACCC GGAAATGCTC
GGCAACTTCT ATGTCCGCAG TGTTTCAGGT TCGATGGTGC CGCTGTCCTC GGTTATCCAG
ATCAATGAAA ATGCCGCACC TGCGGCCATC GAACAGTTCA ATCAGTTGAA CTCGGCCACG
ATTTCGGCGC TGCCCTTGCC GGGCGTGACG ACCGGCCAGG GCCTGCAAAC ACTGGTGGAT
ATCGCCAGAT CGAAAATGCC GGAAGGTTTC TTCCTCGATT ATTCCGGCCA GTCCCGACTG
GAGGTGGAGC AGGGCAACAC GATCCTGATC GCTTTTGGCC TTGCTGTTGT CGTGATCTAT
CTTGTGCTTG CAGCGCAGTT TGAAAGCTTC CGCGATCCAT TCATCATCAT GATGTCGGTT
CCGCTATCGA TTTTCGGCGC TATCGTCCCG CTCAATATCG GCCTTGGCAC GTTGAACATC
TATACGCAGG TAGGGCTTAT CACCCTTGTC GGGCTGATAA CCAAACACGG GATTCTGATG
GTGGAGTTTG CCAATCAGCA GCGCCGCCTG CACGGTCTTT CGCGCTGCGA CGCCATTGTG
GTCGCCGCAG AAACCCGTCT GCGTCCGATC CTGATGACCA CAGCCGCCAT GGCGCTTGGC
GTGGTGCCGC TGATAATCGC CACCGGCGCA GGCGCTGCCG CCCGTTACTC GATGGGGCTG
GTGATCTTCA CAGGCATCAC GATCGGCACC ATCTTTACGC TGTTCGTGGT GCCGATGTTT
TATACTTTCA TTGCAAAGAA GGATGTTGAG GGCGGGTATT TTACGCCCTC GGAAGAAGGC
AGTGAATCTG CGCCAGTGCA ACATCACTGA
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| Protein sequence | MNFSDIFIRR PVLATVVSLM IVLLGLQGIA QLSVREYPKV DETVITVTTA YAGASADLIQ
GFITAPIAEA VATTENIDYV TSSSRPSSST VTVQMKLGAD PDAALTEVIA KVNQVRGNLP
DESDDPVIVK GTGQSFATMY LAAQNPNMTS EQITEYLKRV IQPRMSTIQG VAKAEILGGQ
VYSMRVWLDP IQLAARQITA PEVLSAIKAS NFLSAPGKTK NEYVATSITL KSTLQTPEAF
GAMPIKALGD EVVRLRDVAK VELAAESTDT IVSFNGSAGT FLGVYPTPAA NPIDMAAAVR
KELPSIQASL PEGMSLVLVY DATEQISSSI NEAFTTIGEA VAIVILVIIV FLGSFRSVLI
PIVTIPISLI GVCFFLYVLG FSINLLSLLA MVLAIGLVVD DAIVVLENIH RHIEEGLHPI
DAAFKGMKEI TGSIVAMTIT LAAVFTPLGF IGGLTGSLFR EFAFTLAGAV IISGIAALTI
SPMMCSRMLK HGDQTRFQKF IDRTFSRFEK WYHARVSNSL NYRWITLAIV LCLMGLTGFL
FMNTSSELAP EEDSGALFSM FQAPQYATSA YTNLYAEQID ALTKDLPEQK TRFQIVGMDG
GTTSGIALWV LKDWNERDRS QKQIQQDLTA RISKVAGVQA FIFAPPSLPG TGGGLPISIA
LQSTGPADQV FALAEEIKAE AQASGQFIIV QNSLSFNAPQ TTITIDRDCA ATLGVQVSDI
GSTLGLLTGG ASIAKFDRDS NSYDIITQVP DSYRANPEML GNFYVRSVSG SMVPLSSVIQ
INENAAPAAI EQFNQLNSAT ISALPLPGVT TGQGLQTLVD IARSKMPEGF FLDYSGQSRL
EVEQGNTILI AFGLAVVVIY LVLAAQFESF RDPFIIMMSV PLSIFGAIVP LNIGLGTLNI
YTQVGLITLV GLITKHGILM VEFANQQRRL HGLSRCDAIV VAAETRLRPI LMTTAAMALG
VVPLIIATGA GAAARYSMGL VIFTGITIGT IFTLFVVPMF YTFIAKKDVE GGYFTPSEEG
SESAPVQHH
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