Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BR1057 |
Symbol | |
ID | 1166731 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Brucella suis 1330 |
Kingdom | Bacteria |
Replicon accession | NC_004310 |
Strand | - |
Start bp | 1025909 |
End bp | 1026703 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637329996 |
Product | GGDEF domain-containing protein |
Protein accession | NP_698062 |
Protein GI | 23501935 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGACGG CTCTATGGAA GGCGGCGTTG TTAACGCTGT CCGTTGTCCT GTTTTGTGTT GGGGCGACGT CGATAACTGC TTTTTGGTCC GGTGAAACGC CGGGGCTGAT GGCAATAAGT CTGAGCCTGG GGTTTCTCCT TGTGATGATA TTCCCGTTCT CGGCATTCAT TTTTCTTCGC TATGATAAAC TGAAGGAAGC CTACGCCCAG CTTGAGAAGT CTCATGTCGA GTTGCAGGCG CGGGCGCGTA TCGACCATAT GACGGGACTT CTCAACCGCG AGGCTCTCTT CGAGGCGATG AAGATCAGCC GTTCGCGTAT TGAAACCGGC ACATTGCTGG TCATTGATGC CGATCATTTC AAGGCGATCA ACGATAGTTT CGGCCACGGC GTCGGCGACC GGGCGTTGAA ACTGATTGCC TTCGCCTTGC AAAATGTAAC GCGGAAGGGG GATCTGGTCG GGCGCATCGG TGGGGAAGAA TTCTGCGTAT TCCTGCCCGG TGCAAGCGGT GAGACGGGCG TTCGTGTTGC CCAGCGCATC CGCGCGGAGG TGGAAAATAC GCCGTTCCAT ACGACCGAAT ATCAGGTCTA TCCACTCACC ATCTCAATTG GGGTGGCTTC CGCACCCAAA AGCGAAACCA ATTCGCAGGT GCTGAGCCGC GCCGACCGCT GCCTCTATCT GGCGAAGCAG CGCGGGCGCA ATTGCGTGGT GTTCGATGAG GAAAGCGCCC CTATAACGGG TGCTTCAGTG GTTTCGATCA ATAGCGGGCG TGAAGCGGCG CGCGGCCAAG CATAA
|
Protein sequence | MKTALWKAAL LTLSVVLFCV GATSITAFWS GETPGLMAIS LSLGFLLVMI FPFSAFIFLR YDKLKEAYAQ LEKSHVELQA RARIDHMTGL LNREALFEAM KISRSRIETG TLLVIDADHF KAINDSFGHG VGDRALKLIA FALQNVTRKG DLVGRIGGEE FCVFLPGASG ETGVRVAQRI RAEVENTPFH TTEYQVYPLT ISIGVASAPK SETNSQVLSR ADRCLYLAKQ RGRNCVVFDE ESAPITGASV VSINSGREAA RGQA
|
| |