Gene BR0739 details

Gene Information

• Locus tag: BR0739
• Symbol: metC
• ID: 1166404
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Brucella suis 1330
• Kingdom: Bacteria
• Replicon accession: NC_004310
• Strand: -
• Start bp: 723569
• End bp: 724738
• Gene Length: 1170 bp
• Protein Length: 389 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 637329677
• Product: cystathionine beta-lyase
• Protein accession: NP_697753
• Protein GI: 23501626
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases
• TIGRFAM ID: [TIGR01324] cystathionine beta-lyase, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCTAAGC AGCAGTTGAA GACAGAGAAG TTGGGCATAA ACACGCGGCT TGCTCATGAC 
GGTTATTGCC CCGGCGACTA TCACGGCTTT GTCAACCCGC CCGTCGTGCG CGCATCGACC 
GTGCTTTTTC CCGATGCAGA AACCATGGCA AGCAACGGCC AGAAATATAC CTATGGCACA 
CGCGGCACGC CCACAAGCGA AGCGCTTTGC AAAGCCATAG ACGCGCTGGA GGGCTCTGCG 
GGAACGGTTT GCGTTCCATC GGGGCTAGCG GCCATAACCG TTCCGCTGCT GGGATTTCTT 
TCACCCGGCG ATCATGCGCT TCTTGTCGAT TCGATTTATT ACCCGACCCG CCACTTCGCC 
AATACGATCC TGAAACGCAT GGGTGTGGAC GTCGAATATT ACGATCCGGA AATCGGTGCG 
GACATTGCAA AGCTGATGCG CCCGAACACC AAGGTCGTGT TTACGGAATC ACCCGCCTCC 
AACACATTCG AGATACAGGA TATTCCTGCC ATCGCTGAAG CCGCCCACAA GGGCAATGCC 
ATCGTCATGA TGGACAATAC CTGGGCGACA CCGCTTTATT TCCGGGCGCT CGATTTCGGC 
GTGGACATCA GCATTCACGC CGCAACCAAA TATCCCTCCG GCCATTCCGA CATTCTTTTC 
GGCACCATTT CGACCAATGA GAAATGCTGG CCGCAATTGC TGGAAACACA CGGCACGATG 
GGCCTTTGTG CCGGGCCTGA CGACACCTAC CAGATCTTGC GCGGACTGCG CACCATGGGC 
ATCCGGCTGG AACATCATCG CAAAAGCGCA CTGGAGATTG CCCGCTGGCT GGAAAATCAT 
CCAATGGTGG AACGCGTTCT GCATCCAGCC CTCGAAAGCC ATCCCGGCCA TGAAATCTGG 
AAACGCGATT TTTCCGGTTC GTCCGGCATT TTCTCCTTTG TTCTGGCAAA GGGCGGACAT 
GCGCAAGCGA GCGCCTTCCT CAACGCGCTG GAGATTTTCG GCCTCGGCTA TTCGTGGGGT 
GGCTATCAAA GCCTTGCGCT TGAAGTGAAG CTTGGCGACC GCACCGTTTC GAAGAACGAT 
TATGCCGGGC CGGTCATCCG CCTTCAGATC GGTCTGGAAG ACGTGCTCGA CCTCATCGCC 
GATCTCGAAA GAGGTTTTGC TGCAATCTGA 

 

Protein sequence

MAKQQLKTEK LGINTRLAHD GYCPGDYHGF VNPPVVRAST VLFPDAETMA SNGQKYTYGT 
RGTPTSEALC KAIDALEGSA GTVCVPSGLA AITVPLLGFL SPGDHALLVD SIYYPTRHFA 
NTILKRMGVD VEYYDPEIGA DIAKLMRPNT KVVFTESPAS NTFEIQDIPA IAEAAHKGNA 
IVMMDNTWAT PLYFRALDFG VDISIHAATK YPSGHSDILF GTISTNEKCW PQLLETHGTM 
GLCAGPDDTY QILRGLRTMG IRLEHHRKSA LEIARWLENH PMVERVLHPA LESHPGHEIW 
KRDFSGSSGI FSFVLAKGGH AQASAFLNAL EIFGLGYSWG GYQSLALEVK LGDRTVSKND 
YAGPVIRLQI GLEDVLDLIA DLERGFAAI