Gene BR0609 details

Gene Information

• Locus tag: BR0609
• Symbol: ccmF
• ID: 1166271
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Brucella suis 1330
• Kingdom: Bacteria
• Replicon accession: NC_004310
• Strand: +
• Start bp: 597414
• End bp: 599405
• Gene Length: 1992 bp
• Protein Length: 663 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637329544
• Product: cytochrome c-type biogenesis protein CcmF
• Protein accession: NP_697623
• Protein GI: 23501496
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1138] Cytochrome c biogenesis factor
• TIGRFAM ID: [TIGR00353] c-type cytochrome biogenesis protein CcmF

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTGTCG AGATCGGCCA TTTTGCTCTG GTGCTGGCGC TTGCGCTGTC GATTGTTCAA 
TCCATCGTGC CGGTGGTCGG CGCGCATCGC CGTGATGCGC AACTGATGGC AGTGGCCGTG 
CCAACGGCGC TTGCAGTCTT CGCTCTGATC GTTCTGGCAT CCGCCGCTCT GATCCACGCC 
TATGTCGTTT CCGATTTCTC GGTCCTTAAC GTGGTCGAGA ACTCCCATTC GCAAAAGCCG 
CTTCTCTACA AGATCACCGG TGTCTGGGGC AATCATGAAG GCTCCATGCT GCTCTGGGTG 
TTCATCCTCA CCCTTTTCAG CGCGCTGGTT GCAGCCTTTT CCGGCAATCT GCCTGAAACG 
CTGCGTGCCG ATGTTCTGGC CGTGCAGGGC TGGATTGGCA CCGCCTTTCT CGCATTCATC 
ATTTTCACGT CCAATCCCTT CACCCGCATT TTCCCGGCTC CCATGGAAGG CGGCGATATC 
AACCCGGTCC TTCAGGATAT CGGCCTCGCC ATCCATCCGC CGCTTCTTTA TCTGGGCTAT 
GTCGGCTTTT CGGTCTGTTT CTCCTTTGCT GTTGCGGCGC TTCTCGAAGG CCGTCTCGAC 
GCGGCATGGG CGCGCTGGGT GCGCCCATGG GCGCTCATGG CGTGGATGTT CCTCACCGGC 
GGTATCGCAA TGGGTTCTTA CTGGGCCTAT TATGAACTGG GTTGGGGTGG CTGGTGGTTC 
TGGGATCCGG TTGAAAATGC ATCGCTCATG CCATGGCTGG TCGGGACGGC GCTGCTTCAT 
TCCGCCATCG TCATGGAGAA GCGCTCGGCG CTCAAGATCT GGACGGTGCT TCTCGCCATT 
CTCACCTTCT CGCTGTCATT GCTCGGCACT TTCCTTGTGC GCTCCGGCGT GCTGACCTCC 
GTGCACAGTT TCGCGACCGA TCCGGGGCGC GGCCTGTTCA TTCTGGGCAT TCTCGCGCTC 
TTCATTGGCG GCTCGCTGTC GCTCTTCGCG CTGCGCGTCC AAAGCCTGAG CGCAGGCGGC 
ATTTTCCATC CGATTTCCCG CGAAGGCGCG TTGGTCTTCA ACAATCTCTT TCTGACGACT 
GCCGCCGCAA CCGTTCTCAT CGGAACACTC TATCCGTTGC TTCTTGAAGT TACGACCGGC 
GAAAAGATTT CCGTTGGCGC ACCCTTCTTC AACATGACCT TCGGCCCGCT GATGGTGCCG 
CTCCTGTTTG CCGTGCCTTT CGGCCCGCTG CTCGCATGGA AACGCGGTGA TCTTTATGGC 
GTCGGGCAGC GCCTGATGAC GGCTTTCGCA TTGTCGCTGG CCGTTGTCGG CATCATGCTC 
TGGCGAACCT CCGCGCATTC GGTCCTAGCT GCTCTCGGCA TCGGTCTTGC GGCATGGCTC 
ATCTTCGGCA GCCTGACCGA TCTTGTTCTC AAGGCTGGTA TTGGCAAGGT GTCGGCCAGC 
AAGGCGTTTG CGCGCTTCAA GGGCCTGCCG CGCTCCGTCT TCGGAACGTC GCTTGCGCAT 
ATCGGACTTG GTCTCACGCT TCTCGGTATT GTCAGCGTCA CGACATTCGG TACCGAAAAC 
GTGCTCGTCA TGCAGCCCGG CGGGACCGCC AAAGTCCAGA ATTACACGCT GCGTTTTGAA 
GGACTGCGCC CCATCACGGG TTCCAACTTC ACCGAGAACA GGGGCGCCTT CACGCTGCTT 
GATTCCAGTG GCCGCGATCT GGCCGTGATC GAACCGTCCA AGCGGTTCTT CCCTGCGTGC 
CAGATGCCCA CGACTGAATC CGGTATCAAG ACGCTCTGGT TCAGCCAGGT CTATGTCGCC 
CTTGGTGACG AGCCGGGCAA TGGCGCGGTG GTCGTGCGCA TCTGGTGGAA GCCGCTGGTC 
ACGCTCATCT GGTACGGTGC GCTTGTCATG ATGCTGGGTG GCTTGTTCTC GCTGGCCGAC 
CGCCGCCTCA GGGTTGGTGC GCCTTCCAAG GTGCGCAGGT CCGCCTCGAA GGAAGCGGAA 
GCCGTCGCAT GA 

 

Protein sequence

MSVEIGHFAL VLALALSIVQ SIVPVVGAHR RDAQLMAVAV PTALAVFALI VLASAALIHA 
YVVSDFSVLN VVENSHSQKP LLYKITGVWG NHEGSMLLWV FILTLFSALV AAFSGNLPET 
LRADVLAVQG WIGTAFLAFI IFTSNPFTRI FPAPMEGGDI NPVLQDIGLA IHPPLLYLGY 
VGFSVCFSFA VAALLEGRLD AAWARWVRPW ALMAWMFLTG GIAMGSYWAY YELGWGGWWF 
WDPVENASLM PWLVGTALLH SAIVMEKRSA LKIWTVLLAI LTFSLSLLGT FLVRSGVLTS 
VHSFATDPGR GLFILGILAL FIGGSLSLFA LRVQSLSAGG IFHPISREGA LVFNNLFLTT 
AAATVLIGTL YPLLLEVTTG EKISVGAPFF NMTFGPLMVP LLFAVPFGPL LAWKRGDLYG 
VGQRLMTAFA LSLAVVGIML WRTSAHSVLA ALGIGLAAWL IFGSLTDLVL KAGIGKVSAS 
KAFARFKGLP RSVFGTSLAH IGLGLTLLGI VSVTTFGTEN VLVMQPGGTA KVQNYTLRFE 
GLRPITGSNF TENRGAFTLL DSSGRDLAVI EPSKRFFPAC QMPTTESGIK TLWFSQVYVA 
LGDEPGNGAV VVRIWWKPLV TLIWYGALVM MLGGLFSLAD RRLRVGAPSK VRRSASKEAE 
AVA