| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BR0553 |
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| Symbol | betA |
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| ID | 1166215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Brucella suis 1330 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004310 |
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| Strand | - |
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| Start bp | 548896 |
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| End bp | 550545 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637329490 |
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| Product | choline dehydrogenase |
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| Protein accession | NP_697569 |
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| Protein GI | 23501442 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | [TIGR01810] choline dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.93918 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGCAG ATTTCGTCAT CATCGGCTCC GGCTCTGCCG GTTCGGCCAT GGCCTATCGC
CTTTCAGAAA ACGGGCGCTA TTCGGTGATC GTCATCGAAT ATGGCGTGCC CGATGTGGGC
CCGCTGATCC AGATGCCCGC CGCCCTCTCC TTTCCCATGA ACATGGAAAC CTACGACTGG
GGCTTTTCCA GCGAGCCGGA ACCGCATATT GGCGGGCGCA GCCTCGTCAC CCCCCGCGGC
AAGGTGCTGG GCGGGTCGTC TTCCATCAAT GGCATGGTTT ATGTGCGCGG CCATGCGTGC
GATTTCGACC ATTGGTCACA AAGCGGTGCG CGAGGCTGGG CCTATGCCGA TGTGCTGCCC
TATTTCAAGC GGATGGAAAA TTCGCAAGGC GGACAGGAAG GCTGGCGCGG CACCAATGGC
CCGCTTTATG TCCAGCGCGG CAAGCGCGAC AATCCGCTGT TCCATGCCTT TGTCGAGGCT
GGCCATCAGG CAGGCTTTGA AGTCACCGAT GATTATAACG GTGAGAAGCA GGAAGGCTTC
GGCCCGATGG AGCAGACAAT TCATAATGGC CGCCGCTGGT CAGCCGCCAA TGCCTATCTG
AAACCGGCTC TCAAGCGCCC GAATGTCAAG CTGGTCAAAG GGTTTGCGCG CAAGATCGTG
CTGGAAGGAA AACGCGCCGT CGGGGTGGAA ATCGAGGCGG GCCGCACCTT TTCCACCATC
CGCGCGCGGC GCGAAGTGAT TATTGCCGCC TCTTCCATCA ACTCGCCCAA ACTGTTGATG
CTTTCCGGCA TCGGGCCTGC CGCGCATTTG AAGGAACACG GCATCGACCT GGTGGCCGAC
CGCCCCGGCG TGGGCCAGAA CCTGCAAGAC CATCTGGAAG TCTATATCCA GCAGGAATGC
ACCCAGCCTA TCACGCTTTA TTCCGAGCTG AACCTGTTTT CAAAAGCCAG GATTGGCGTG
GAATGGCTGC TCTTCAAAAC CGGCGACGGT GCAACAAACC ATTTTGAATC CGCCGCCTTC
GTCCGCTCCA AGGCGGGTGT GGAATATCCC GATATCCAGT ATCACTTCCT GCCGGTTGCC
ATCCGCTATG ACGGCAAGGC GGCAGCGCAG TCGCATGGGT TCCAGGCCCA TGTAGGCCCC
ATGCGCTCGA AATCGCGCGG CAGCGTCACG CTTCGCTCAG CCAACCCGCG TGAAAAGCCT
GTCATCAAGT TCAATTATAT GTCGCATGAA GACGATTGGG CCGATTTTCG CCATTGCGTG
CGGCTGACGC GGGAAATCTT CGGGCAGGCC GCGTTCGATC CCTATCGCGG AGCGGAAATC
CAGCCGGGCG CCCATGTGCA GACGGACGAT GAAATCGACA ATTTCATCCG CGAGCATGTC
GAAAGCGCGT TCCATCCATG CGGCACCTGC AAAATGGGGG CGGTTGACGA TCCGATGGCC
GTGGTCGATC CTGAATGCCG CGTCATCGGC GTCGAAGGCT TGCGCGTTGC GGATTCATCC
ATCTTCCCGC GCATCACCAA CGGCAATCTC AACGGCCCAT CAATCATGGT GGGCGAAAAG
GCGTCCGACC ACATTCTGGG CCGCACGCCG CTCGCCCGCT CCAATCAGGA GCCGTGGATC
AATCCGCGGT GGCAGGTGTC GGACCGCTAA
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| Protein sequence | MEADFVIIGS GSAGSAMAYR LSENGRYSVI VIEYGVPDVG PLIQMPAALS FPMNMETYDW
GFSSEPEPHI GGRSLVTPRG KVLGGSSSIN GMVYVRGHAC DFDHWSQSGA RGWAYADVLP
YFKRMENSQG GQEGWRGTNG PLYVQRGKRD NPLFHAFVEA GHQAGFEVTD DYNGEKQEGF
GPMEQTIHNG RRWSAANAYL KPALKRPNVK LVKGFARKIV LEGKRAVGVE IEAGRTFSTI
RARREVIIAA SSINSPKLLM LSGIGPAAHL KEHGIDLVAD RPGVGQNLQD HLEVYIQQEC
TQPITLYSEL NLFSKARIGV EWLLFKTGDG ATNHFESAAF VRSKAGVEYP DIQYHFLPVA
IRYDGKAAAQ SHGFQAHVGP MRSKSRGSVT LRSANPREKP VIKFNYMSHE DDWADFRHCV
RLTREIFGQA AFDPYRGAEI QPGAHVQTDD EIDNFIREHV ESAFHPCGTC KMGAVDDPMA
VVDPECRVIG VEGLRVADSS IFPRITNGNL NGPSIMVGEK ASDHILGRTP LARSNQEPWI
NPRWQVSDR
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