Gene BR0522 details

Gene Information

• Locus tag: BR0522
• Symbol: gmd
• ID: 1166184
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Brucella suis 1330
• Kingdom: Bacteria
• Replicon accession: NC_004310
• Strand: -
• Start bp: 520907
• End bp: 521995
• Gene Length: 1089 bp
• Protein Length: 362 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 637329463
• Product: GDP-mannose 4,6-dehydratase
• Protein accession: NP_697544
• Protein GI: 23501417
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1089] GDP-D-mannose dehydratase
• TIGRFAM ID: [TIGR01472] GDP-mannose 4,6-dehydratase

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAGAAAG TCGCACTTAT CACAGGTATC ACCGGCCAAG ACGGCGCCTA CCTTGCGGAA 
TTGCTTCTAC AAAAAGGTTA TGCAGTACAC GGGATTAAGC GTCGCACCTC GCAATTTAAC 
ACAGCACGTA TCGATCATCT GTACCATGAT CCGCACGAGC AGGGTGTCGA TCTAACACTT 
CATCATGGCG ATCTAACAGA TACGTCAAGC TTGGTTCGAA TCATGCAGCT CGTTCGGCCG 
GATGAAGTTT ATAACCTTGG CGCACAAAGC CATGTTGCTG TTTCATTTGA GGAGCCGGAG 
TATACTGCGA ACTCAGACGC ACTAGGTGCC CTTCGTCTGC TAGAGGCGAT CCGAATTCTT 
GGAATGGAGA AGCAGACCCG GTACTACCAA GCATCCACCT CTGAGCTTTA TGGTCTGGTT 
CAAGAAATCC CGCAAAAAGA AACGACGCCT TTTTACCCTC GGTCGCCCTA TGCCGCAGCG 
AAGCTTTATG CCTATTGGAT TACGGTAAAC TACCGAGAGG CGTATGGTAT ATATGCTTGT 
AATGGCATAC TTTTTAACCA TGAATCTCCA CTTAGAGGAG AGACTTTTGT CACGAGAAAA 
ATTACTCGCG CTTTAGCTAG AATTAAGATC GGTAATCAGA ATCGCTTATA CTTAGGGAAT 
TTGGACTCAT TACGCGACTG GGGGCATGCT CGGGACTACG TCGAGATGCA GTGGTTAATG 
CTTCAACAGG ATCAACCAGA AGATTTTGTA ATAGCAACTG GTAAACAATA TTCAGTTCGA 
GAATTTGTCA CGCTCGCTGC TAAAGACATA GGCATTGAGA TGCGATGGGA AGGTAGCGGT 
GAAGCCGAGA AGGGTTATGA TGCCAAGACC GGTGCATGTA TTGTCGAGGT CGATCCTAGA 
TACTTTCGAC CAGCCGAGGT GGAAACTCTT CTGGGAGATG CGACCAAGGC GCATCAAAAA 
CTGGGCTGGA AGCCGAAAAT CTCTTTTGAG ACGCTTGTAT CTGAGATGAT AGCAGAAGAC 
TTAGCGGCGG CGGCTCGTGA GAATTTGCTG CGCGAACATG GTCACCAATT TTTCGCCCCT 
AAGGAATGA 

 

Protein sequence

MKKVALITGI TGQDGAYLAE LLLQKGYAVH GIKRRTSQFN TARIDHLYHD PHEQGVDLTL 
HHGDLTDTSS LVRIMQLVRP DEVYNLGAQS HVAVSFEEPE YTANSDALGA LRLLEAIRIL 
GMEKQTRYYQ ASTSELYGLV QEIPQKETTP FYPRSPYAAA KLYAYWITVN YREAYGIYAC 
NGILFNHESP LRGETFVTRK ITRALARIKI GNQNRLYLGN LDSLRDWGHA RDYVEMQWLM 
LQQDQPEDFV IATGKQYSVR EFVTLAAKDI GIEMRWEGSG EAEKGYDAKT GACIVEVDPR 
YFRPAEVETL LGDATKAHQK LGWKPKISFE TLVSEMIAED LAAAARENLL REHGHQFFAP 
KE