Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BR0520 |
Symbol | rfbD |
ID | 1166182 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Brucella suis 1330 |
Kingdom | Bacteria |
Replicon accession | NC_004310 |
Strand | - |
Start bp | 518999 |
End bp | 519781 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637329461 |
Product | O-antigen export system permease protein RfbD |
Protein accession | NP_697542 |
Protein GI | 23501415 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATATCGT ATATGGCTAA TGTCTGGAAG GTACGCCACT TCTGGTGGCA CCTTTCAATG TCTGATTTAC GTGGGCGCTT CAGGCGGTCC TCCTTGGGAA TATTATGGGC AGTTATACAG CCACTAGCGC TCACGCTGCT ACTGTCTTTC GTGTTTTCTA AATTGTTGAA TCAAAGTATA TCTGCATATG CCCCCTATAT TCTATCTGGG ATTATTATCT GGGAATACAT ATCATTTACA GTGGTTGGTG GCTCAACAGC GCTTGTGCAA GCCGATGCAT ATATAAAGCA AACCAGAAAT CCTCTTGCAA TTTACACGCT TAGGAACACT GTTTCTGGCT TGGTCGTATT ATCCGTAGCA AGTATCTCCC TATTCGGGTG GGTACTTATC ATGTTTCCTG AAAACTTCTC GCTTTCATGG TTAGCAATAC CAACTTTGCT ACCCATCCTT GCTTTGATAG TTTGGCCGCT TGCCACAATC GTCGGCTACA TCGGCGCAAG ATTTCGAGAT CTGCCGAATG CTCTGGCGCT CGTGTTACAG GCAGCTTGGT TTGTTTCGCC GGTCTATTTT AAAGAATCGA TGTTCAGGCA GGGTGGATTG AATGCATTCG TTGATTATAA CCCTATTTAC CACGTGATGC AGATTCTAAG AGCCCCTGTC CTTTATGGGG AATGGCCTAC GGCTACCAAT TACATTTGGT GCTTAGGTGT GAGCCTCCTC CTAACCTGCG TGGCAGTAGC TGTGGGGATG CGTGCGGAGA AGAGAGCCAT TTTTTACCTA TGA
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Protein sequence | MISYMANVWK VRHFWWHLSM SDLRGRFRRS SLGILWAVIQ PLALTLLLSF VFSKLLNQSI SAYAPYILSG IIIWEYISFT VVGGSTALVQ ADAYIKQTRN PLAIYTLRNT VSGLVVLSVA SISLFGWVLI MFPENFSLSW LAIPTLLPIL ALIVWPLATI VGYIGARFRD LPNALALVLQ AAWFVSPVYF KESMFRQGGL NAFVDYNPIY HVMQILRAPV LYGEWPTATN YIWCLGVSLL LTCVAVAVGM RAEKRAIFYL
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