Gene BR0520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBR0520 
SymbolrfbD 
ID1166182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrucella suis 1330 
KingdomBacteria 
Replicon accessionNC_004310 
Strand
Start bp518999 
End bp519781 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content46% 
IMG OID637329461 
ProductO-antigen export system permease protein RfbD 
Protein accessionNP_697542 
Protein GI23501415 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATATCGT ATATGGCTAA TGTCTGGAAG GTACGCCACT TCTGGTGGCA CCTTTCAATG 
TCTGATTTAC GTGGGCGCTT CAGGCGGTCC TCCTTGGGAA TATTATGGGC AGTTATACAG
CCACTAGCGC TCACGCTGCT ACTGTCTTTC GTGTTTTCTA AATTGTTGAA TCAAAGTATA
TCTGCATATG CCCCCTATAT TCTATCTGGG ATTATTATCT GGGAATACAT ATCATTTACA
GTGGTTGGTG GCTCAACAGC GCTTGTGCAA GCCGATGCAT ATATAAAGCA AACCAGAAAT
CCTCTTGCAA TTTACACGCT TAGGAACACT GTTTCTGGCT TGGTCGTATT ATCCGTAGCA
AGTATCTCCC TATTCGGGTG GGTACTTATC ATGTTTCCTG AAAACTTCTC GCTTTCATGG
TTAGCAATAC CAACTTTGCT ACCCATCCTT GCTTTGATAG TTTGGCCGCT TGCCACAATC
GTCGGCTACA TCGGCGCAAG ATTTCGAGAT CTGCCGAATG CTCTGGCGCT CGTGTTACAG
GCAGCTTGGT TTGTTTCGCC GGTCTATTTT AAAGAATCGA TGTTCAGGCA GGGTGGATTG
AATGCATTCG TTGATTATAA CCCTATTTAC CACGTGATGC AGATTCTAAG AGCCCCTGTC
CTTTATGGGG AATGGCCTAC GGCTACCAAT TACATTTGGT GCTTAGGTGT GAGCCTCCTC
CTAACCTGCG TGGCAGTAGC TGTGGGGATG CGTGCGGAGA AGAGAGCCAT TTTTTACCTA
TGA
 
Protein sequence
MISYMANVWK VRHFWWHLSM SDLRGRFRRS SLGILWAVIQ PLALTLLLSF VFSKLLNQSI 
SAYAPYILSG IIIWEYISFT VVGGSTALVQ ADAYIKQTRN PLAIYTLRNT VSGLVVLSVA
SISLFGWVLI MFPENFSLSW LAIPTLLPIL ALIVWPLATI VGYIGARFRD LPNALALVLQ
AAWFVSPVYF KESMFRQGGL NAFVDYNPIY HVMQILRAPV LYGEWPTATN YIWCLGVSLL
LTCVAVAVGM RAEKRAIFYL