Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BR0402 |
Symbol | |
ID | 1166063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Brucella suis 1330 |
Kingdom | Bacteria |
Replicon accession | NC_004310 |
Strand | + |
Start bp | 405385 |
End bp | 407250 |
Gene Length | 1866 bp |
Protein Length | 621 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637329349 |
Product | TPR domain-containing protein |
Protein accession | NP_697433 |
Protein GI | 23501306 |
COG category | [R] General function prediction only |
COG ID | [COG4785] Lipoprotein NlpI, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGCTAG GATCGAAACA TCGCCCGCTT TATGGATTGC TGCTCTCGCT TCTGGCGGGC ATCGCAATTT CGACGAGCGG AGCATTGGCC AAGACCACAC CCGATCCCGT TCGCGCGCAG GTCCGCGCCG GATCCTTCGC GGGCGCTTAT CTTGCGGGCC GCACGGCTGA ATCCGACGAC AACCTTTCCG CTGCCGTGGA TTTCTATCGT CAGGCCATGG CTTTCGATCC GAACAACAGC CAGATCAAGC AGGACCTGAT GCTGGTTCTG CTGACCGAAG GCCGTTTCAA GGATGCGTTG CCGCTTGCCC ATGAATTGCA GAATGTGACG GCCATCGAGC GGTTTTCTCG GCTGGCACTG GCCATTGATG CGATCAACCG CCAGCAATAT CGCAAGGTCG GCCCGCTTCT CATGTTCTCG CTCCAGTCGG ACATGGACCG GCTGTTGATC AATTTGATGA ATGCCTGGGT GAAGGTCGGG CAGGGCAATC CGAAAGAGGC GCTGGCCGAT GTGCAGAAAA TGGATGGGCC GGAATGGTAC GATCTTTTCC GCACCTATAA TGCCGCGTTG ATTGCCGATC TTGCAGGCCG CAAGCAGGAA GCGCGGGACT ATTACCAGCA GGCCATCGAC GACCGCCGCG GCGGCAGCGC CGCGCCCGAC ACTTATGAGC GCGTGGTCAT GGCCTTTGCC GCGTTCAAGC TGCGCCAGGG CGACAGGGCA GGTGCGATCA AGACGCTGAA GGATGCCGAA GAGCTTCTGA ATGGCCGCAT GACCATCACT GAAATGCGCG AGAAGATCGA GGCGGGCCAC AAATATGGCC GCTTGGTCAA GACCGCGCAG GACGGGGCCG CCGAAACGCT CTATACGCTG GGCACAGCCA TCAACCGCAG CGGTGCGGAA GCTTTCGCCA AGCTCTATCT CCAGATGTCG CTGCCGCTTC GCCCGGATAA CGACGCCACG CTCTACCAGC TTGGCGATAT TTCGGCAAAG TTGCACGAGC CGCAAAAGGC CGTCGAATAT TATGGCCGCG TGCCGGAACA ATCGCCCTAT CGCCGCGATG CGGAAATGCA GCGCGCGCTC AATCTGGCGG AAAACGACCA GTCGGCGGAA GCCATCAAGC AGTTGAAAGT CCTGCTTGGC CGCGACAAGT CCGACATGCG CACCTATCTG GCGCTGGGCG GCGTTTATGC GCAGGACAAG AATTTTGCGG ATGCGGCAAA GATTTACGAT GCGGCGGTCG AGCAGATCAA GACGCCGGCA CGCAAGGATT GGCCACTCTT CTATCAGCGC GGCATCGCCT ATGAACGGCT ACAGGAATGG GACAAGGCGG AGCCCAATTT CCGCAAGGCG CTGGAGCTTT ATCCCGATCA GCCGCAGGTT CTGAACTATC TTGGTTATTC CTGGGTGGAC CGGAACGAAA ACCTCGATGA AGCCCTGAAC ATGATCAGGA AAGCGGTCGA GTTGCGCCCG CAGGACGGCT ATATCGTTGA TTCGCTTGGC TGGGCCTATT ACCAGCTTGG CCGTTATAAC GACGCTGTGG TCGAACTGGA AAAGGCCGTG AAGCTGCGCC CGGAAGACCC GACCATCAAC GACCATATGG GCGATGCCTA TTGGCGGGTC GGTCGTCTGC TTGAAGCAAC CTTCCAGTGG AACCATGCCA TTGCGGGCAA GCCGGAACCG GAAGAACTGG CGAAAATCAA GGAAAAGCTG AAGAAGGGCC TGCCGGATAT TCCGGGCCAG TCGGCTGCCG ATGCAACAAA GCCTGCCGGG AAAAAGCCAG ATGAGGCAAA GCCGGAAGCG CCTGCTCCAT CGGCCACGCC GGCTGCACCT TCCGACAAGG CCCCGGAAAA GCCGACAACC GATTGA
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Protein sequence | MRLGSKHRPL YGLLLSLLAG IAISTSGALA KTTPDPVRAQ VRAGSFAGAY LAGRTAESDD NLSAAVDFYR QAMAFDPNNS QIKQDLMLVL LTEGRFKDAL PLAHELQNVT AIERFSRLAL AIDAINRQQY RKVGPLLMFS LQSDMDRLLI NLMNAWVKVG QGNPKEALAD VQKMDGPEWY DLFRTYNAAL IADLAGRKQE ARDYYQQAID DRRGGSAAPD TYERVVMAFA AFKLRQGDRA GAIKTLKDAE ELLNGRMTIT EMREKIEAGH KYGRLVKTAQ DGAAETLYTL GTAINRSGAE AFAKLYLQMS LPLRPDNDAT LYQLGDISAK LHEPQKAVEY YGRVPEQSPY RRDAEMQRAL NLAENDQSAE AIKQLKVLLG RDKSDMRTYL ALGGVYAQDK NFADAAKIYD AAVEQIKTPA RKDWPLFYQR GIAYERLQEW DKAEPNFRKA LELYPDQPQV LNYLGYSWVD RNENLDEALN MIRKAVELRP QDGYIVDSLG WAYYQLGRYN DAVVELEKAV KLRPEDPTIN DHMGDAYWRV GRLLEATFQW NHAIAGKPEP EELAKIKEKL KKGLPDIPGQ SAADATKPAG KKPDEAKPEA PAPSATPAAP SDKAPEKPTT D
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