| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BR0291 |
|---|
| Symbol | |
|---|
| ID | 1165952 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brucella suis 1330 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004310 |
|---|
| Strand | + |
|---|
| Start bp | 301150 |
|---|
| End bp | 302343 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637329241 |
|---|
| Product | HlyD family secretion protein |
|---|
| Protein accession | NP_697325 |
|---|
| Protein GI | 23501198 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0845] Membrane-fusion protein |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTTTGA ACCGTACCAT CCGGTGTTTT GCGGCAGGGG CCGCTTTTAT TGTTTTTGCG
GCGCAGCCCG CCCTGGCACA GGCGCCTGGT GGCGCCACGC CACCGCCGCC GCAGGTTTTC
GTCGTTGATA TCAAGCCGCA TGACGTGCCT GTGACCTATG AATATGCCGC ACGTATCAAC
GCATATAGAA ATGTCCAGGT GCGCGCCCGC GTCGGCGGTA TTCTGCTGCA CCGCAATTTC
GTTGAGGGCA CGCAGGTCAA GGCAGGCGAG GTCCTGTTCG AGATCGATCC GGCGCCTTAT
CAGGCGGAGC TTGAAAAGGC GCAGGCGCAA GTCGCACAGG CCGAGGCGCA GTACCAGCAG
TCGATCCGCG ACGCTGAACG CGCCGAACAG CTTGTGCAGC AAAAGGTGCA GAGCGCGGCG
GTGCGCGATT CCGCTTTTGC AACGCGCGAT CTCAACAAGG CTGCCGTTGC CGCGGCCAAG
GCGCAGTTGC GCACGGCTGA ACTGAACCTG AGCTATACCA AGGTGACAGC GCCGATCAGC
GGCATCACCA GCCAGGAACA GGTGAATGAA GGCAGCCTTA TCGGTACGGA TGCCTCTTCG
AGCCTTCTCA CTTCGGTCAC GCAGCTCGAC CCGGTCTATG TGAATTTCTC CTTCACCGAT
ACGGAAGCAG CGGAAATCGC CAAGCTTCGC GCCGAACGCG GCGCGACGGG CGAGGATGCC
GACCGGCTGA AAATCAAGAT CCTTTTCGGC GACGGTAAGG CCTACGACCA TGAAGGCACC
ATCGACTTCA CCTCGTCCTC GCTTGATACG GAAACCGGCA CACTCGGCGT TCGCGCCGTC
GTGGAAAACC CCAATCACCG GCTTATTCCC GGCCAGTTCG TGCGTGCTGA AATCCTCGAT
ATTCAGGTGA AGGATGCCAT CACCGTGCCC AAGGCCGCCC TCATGCAGAG CGCGCAGGGG
CAGTTCGTCT ATGTGGTCAA CAAGGACAAT GTCGTTGAAG TGCGCCCGGT CACAGGCGCC
CGTGAGTTGA AAAACGACTG GCTGATCTCG CAGGGTCTCA ATTCCGGTGA TCGTGTCATT
ACCGAAGGCG TCATCAAGGC AGTGCCGGGC CGTCCGGTCC AGCCAGTAGT GCAGGGCGTG
GATGACAAGG CGCAAGCTGA GGCTGGAAAA GAACAGGCGG CAGACAAGAA ATGA
|
|---|
| Protein sequence | MTLNRTIRCF AAGAAFIVFA AQPALAQAPG GATPPPPQVF VVDIKPHDVP VTYEYAARIN
AYRNVQVRAR VGGILLHRNF VEGTQVKAGE VLFEIDPAPY QAELEKAQAQ VAQAEAQYQQ
SIRDAERAEQ LVQQKVQSAA VRDSAFATRD LNKAAVAAAK AQLRTAELNL SYTKVTAPIS
GITSQEQVNE GSLIGTDASS SLLTSVTQLD PVYVNFSFTD TEAAEIAKLR AERGATGEDA
DRLKIKILFG DGKAYDHEGT IDFTSSSLDT ETGTLGVRAV VENPNHRLIP GQFVRAEILD
IQVKDAITVP KAALMQSAQG QFVYVVNKDN VVEVRPVTGA RELKNDWLIS QGLNSGDRVI
TEGVIKAVPG RPVQPVVQGV DDKAQAEAGK EQAADKK
|
|---|
| |