Gene BR0172 details

Gene Information

• Locus tag: BR0172
• Symbol: hrcA
• ID: 1165829
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Brucella suis 1330
• Kingdom: Bacteria
• Replicon accession: NC_004310
• Strand: -
• Start bp: 184226
• End bp: 185350
• Gene Length: 1125 bp
• Protein Length: 374 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 637329122
• Product: heat-inducible transcription repressor
• Protein accession: NP_697210
• Protein GI: 23501083
• COG category: [K] Transcription
• COG ID: [COG1420] Transcriptional regulator of heat shock gene
• TIGRFAM ID: [TIGR00331] heat shock gene repressor HrcA

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGCAGC CTTATATTTA TTACATTCAA TTCAGAGGGT TCGCAGAACA AGCCATGATG 
AGACCGCCGG AACACCAGCT CCTCAGTTCG CTCGACCAGC GCTCGCGCGA TATTTTCCGG 
CTCATCGTCG AAACCTATCT CAATGACGGT GATCCGGTCG GCTCACGCAA TCTCTCGCGG 
CTTCTGCCGC ACACGCTTTC GCCCGCCACG ATCCGCAATG TGATGAGCGA TCTGGAACAT 
CTGGGCCTGA TCTATGCGCC GCATATTTCC GCTGGCCGCC TGCCGACGCA GATCGGCCTG 
CGCTTCTTTG TCGATGCCTT TCTGGAAGTG GGAGACCTGC CGCCGGAGGA ACGCTCCTCC 
ATCGAGGCGC AGGTACGCGC CGCAGGCACC AGCAATTCGG TGGAAAGCGT CCTGACCGAA 
GCAAGCCAGG TGCTTTCAGG CCTGTCACGC GGGGCGGGCC TTGTGCTCAC CAACAAGACC 
GATGTGGCGC TGAAACATAT CGAATTCGTG CGCCTTGAAC CCATGCGCGC CCTGGCTGTT 
CTGGTCATGC AGAACGGCGA TGTGGAAAAC CGTGTGATTG ATCTTCCGGC GGGCATCAGC 
ACCTCGCAGC TCATCGAAGC CTCCAATTTT CTCAATGCCC ATATTCATGG CCACACGCTT 
TCGGAAGCCA AATCCGAATT GAGGAAACTG AGCGAGGAAA CACGGCGGGA GCTTGACCAG 
CTTTCACAGG AACTGGTGGC GAAGGGACTT GCAGTATGGA GCGGCGCCGG CGCGGACCAG 
CCCGCACGCC TCATCGTGCG CGGACGCGCC AATCTTCTGG AAAACGTCCA CGCACAGGAA 
GACATAGAGC GGCTGCGCCA TCTCTTCGAC GATCTCGAAA CCAAGGACGG GATGGTGCAG 
CTTCTGGACC TGGCGGAAGC AGGCTCGGGC GTGCGCATTT TCATCGGTTC GGAAAACAAG 
CTTTTCTCGC TTTCCGGCTC GTCGCTGGTG GTTGCCCCCT ATCGCGACAG CGAACAACGG 
GTTATCGGTG CCCTGGGGGT GATCGGGCCG ACCCGGCTCA ATTATGCGCG CATCGTTCCG 
ATGGTGGACT ATACGGCGCA GATCGTATCG AGGCTGCTGC GATAA 

 

Protein sequence

MPQPYIYYIQ FRGFAEQAMM RPPEHQLLSS LDQRSRDIFR LIVETYLNDG DPVGSRNLSR 
LLPHTLSPAT IRNVMSDLEH LGLIYAPHIS AGRLPTQIGL RFFVDAFLEV GDLPPEERSS 
IEAQVRAAGT SNSVESVLTE ASQVLSGLSR GAGLVLTNKT DVALKHIEFV RLEPMRALAV 
LVMQNGDVEN RVIDLPAGIS TSQLIEASNF LNAHIHGHTL SEAKSELRKL SEETRRELDQ 
LSQELVAKGL AVWSGAGADQ PARLIVRGRA NLLENVHAQE DIERLRHLFD DLETKDGMVQ 
LLDLAEAGSG VRIFIGSENK LFSLSGSSLV VAPYRDSEQR VIGALGVIGP TRLNYARIVP 
MVDYTAQIVS RLLR