Gene BR0010 details

Gene Information

• Locus tag: BR0010
• ID: 1165666
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Brucella suis 1330
• Kingdom: Bacteria
• Replicon accession: NC_004310
• Strand: -
• Start bp: 12680
• End bp: 14548
• Gene Length: 1869 bp
• Protein Length: 622 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 637328964
• Product: ABC transporter, periplasmic substrate-binding protein, putative
• Protein accession: NP_697053
• Protein GI: 23500926
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG4166] ABC-type oligopeptide transport system, periplasmic component

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.427067
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGCTT TTTGGGTGAG TGCATTCGCG GTGGCCATGC TTGCAAGCGC CATGCCGGCC 
AGTCGTGCGG ACAATGCCGA ACCCCAATGG CGATATTCCT CCAGCCTGCT TGATGAGCCC 
AAATATCCGG CCGATTTCAA GCATTACGAC TATGTGAACC CCGATGCGCC GAAGGGCGGT 
ACGCTGAACC TGGTCGCCGT CGGCACTTTC GACAACCTCA ATCCATATGT GGTGCAGGGT 
GTTTCCGCCG CTGGCCTGTC CGATTTCGGT GGCGGGATGC TTTACGATAC GCTGATGGCG 
GATTCGCAGG ATCAGGGATC GACGCAATAT CCGCTCATCG CCAGCGCCCT GCAATATCCC 
GACGATTTCT CCTGGGTCAA ATTCAAGCTC AATCCCGATG CGAAATGGCA TGACGGCCAG 
CCGATCACCG TCGATGACGT GATCTGGTCG TTCAATGTGC TGAAAAAGCA GTCGCCGATG 
TACAACAAAT ATTATAGCGA TGTGGAAAGC GCGGAAAAAA CCGGCGAGCA TGAAGTGAAA 
TTCACCTTCA GCCGGAAGGG CAATCGCGAA CTTCCGCAGA TTATGGGGCA GCTTGCCATT 
TTGCCGAAGC ATTGGTGGAC GGCAAAGGAT GCACGGGGCA AGCAGCGCGA TATCACCCGC 
CCGACGCTTG AAATCCCGCT TGGCTCCTCT GCCTACAAGA TCGAAAGCAT GAAGCCGGGC 
CACTCCATCA TCTGGGCGCG CGTGGAGGAT TACTGGGGCA AGGATCTGCC TGTGAATGTC 
GGGCGCAACA ATTTCGATCA TGTTGCTTAC GAATATTATT TCAATGAGGA TGCAACCTGG 
GAAGCCTTCA AGAAGGGCGG CCAATACGAC TATCGCAATG AAAACCGTGC CCAGCGCTGG 
GCTGAACAGT ATAATTTCCC GGCAGTGCAG CGCGGCGATG TCGTGAAAGC TTCCTTCCCC 
TTCCATGCGG TCGGGCGAAT GCAGGGCTAT TTCCTCAACA CCCGCCGCGA CAAGTTCAAG 
GATCCGAAGG TGCGTGAGGC GCTGACCTAC GCCTTCGATT TTGAATCGAT GAACCGCCTC 
ATGTTCTATA ACCAGTACAA GCGCATCAAC AGCTATTTCG CCGGAAACGA ACTGGCATTG 
AGCGGCCCGC CGACACCGGC AGAACAGGCT ATTCTGGAAA CGGTGAAGGA CGCACTTCCC 
GCCGACGCGC TGACCAAGGA ATTCAAGCTG CCGGTCTATG ACACGCCGCA GGCAACTCGC 
GAAAACCTGC GCACCGCGCT GAAGCTCTTT TCGCAAGCGG GCTGGACACT CAAAGGCAAC 
ACGCTTGTCG ATGCCAAGGG CAATCCGTTC ACCATCGAAT TTCTCGGCCA GGACCCGACG 
GACGAGCGTA TCTATAATCC TTTCGCAGCC AGCCTGCGCA AGATCGGCAT CAATGCGACC 
GTGCGTATTG TGGACGCCGC GCAATACCAG GCCCGCGTCA ATGATTTCGA CTATGATGTC 
ATCACCGCCG TCATTGCGCA GACAGCCTCT CCCGGCAATG AGCAGCGCGA TATGTGGGGC 
TCCAAGGCAG CCGATTTCAA AGGCAGCCGC AACTATGCCG GCATCCGGAA TCCGGCCATA 
GACAAGCTTA TCGACCTTGT CGTCTATGCC AAGGACCACG AGGAGCTGGA GGCGGCAGCC 
CACGCGCTCG ACCGCGCACT TTTATGGAAC CATTACGTCA TCCCACAATG GTATTCCGAC 
CACATCAACG TGGCTTACTG GAACAAGTTC GGAATGCCGG AAAAGCAGCC CGACTATCTT 
GGGATTGACC CTTACTCCTG GTGGATAGAT CCTGCGAAGG AAGCTAAGCT CAAGACCGGC 
GGTGCATGA 

 

Protein sequence

MKAFWVSAFA VAMLASAMPA SRADNAEPQW RYSSSLLDEP KYPADFKHYD YVNPDAPKGG 
TLNLVAVGTF DNLNPYVVQG VSAAGLSDFG GGMLYDTLMA DSQDQGSTQY PLIASALQYP 
DDFSWVKFKL NPDAKWHDGQ PITVDDVIWS FNVLKKQSPM YNKYYSDVES AEKTGEHEVK 
FTFSRKGNRE LPQIMGQLAI LPKHWWTAKD ARGKQRDITR PTLEIPLGSS AYKIESMKPG 
HSIIWARVED YWGKDLPVNV GRNNFDHVAY EYYFNEDATW EAFKKGGQYD YRNENRAQRW 
AEQYNFPAVQ RGDVVKASFP FHAVGRMQGY FLNTRRDKFK DPKVREALTY AFDFESMNRL 
MFYNQYKRIN SYFAGNELAL SGPPTPAEQA ILETVKDALP ADALTKEFKL PVYDTPQATR 
ENLRTALKLF SQAGWTLKGN TLVDAKGNPF TIEFLGQDPT DERIYNPFAA SLRKIGINAT 
VRIVDAAQYQ ARVNDFDYDV ITAVIAQTAS PGNEQRDMWG SKAADFKGSR NYAGIRNPAI 
DKLIDLVVYA KDHEELEAAA HALDRALLWN HYVIPQWYSD HINVAYWNKF GMPEKQPDYL 
GIDPYSWWID PAKEAKLKTG GA