Gene SAG2156 details

Gene Information

• Locus tag: SAG2156
• Symbol: recF
• ID: 1014967
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Streptococcus agalactiae 2603V/R
• Kingdom: Bacteria
• Replicon accession: NC_004116
• Strand: +
• Start bp: 2137436
• End bp: 2138545
• Gene Length: 1110 bp
• Protein Length: 369 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 637317321
• Product: recombination protein F
• Protein accession: NP_689141
• Protein GI: 22538290
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1195] Recombinational DNA repair ATPase (RecF pathway)
• TIGRFAM ID: [TIGR00611] recF protein

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.000779125
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTGGATAA AAAATATTTC TTTAAAACAT TATCGTAATT ATGAAGAAGC ACAAGTAGAT 
TTTTCACCCA ACCTCAATAT TTTCATTGGC CGCAATGCTC AAGGAAAGAC AAATTTTTTA 
GAAGCAATCT ACTTCTTGGC TTTGACTCGA AGTCACCGTA CCCGTTCTGA TAAAGAACTT 
GTACATTTTA AACACCATGA TGTACAAATT ACAGGTGAGG TAATCCGCAA AAGTGGCCAT 
CTTAACTTAG ATATTCAATT ATCTGAAAAA GGAAGAATCA CTAAAGTTAA CCATCTTAAA 
CAGGCAAAAT TATCTGATTA TATTGGGGCT ATGACTGTCG TACTTTTTGC CCCTGAAGAT 
CTTCAATTAG TTAAAGGTGC ACCTAGTCTA AGACGAAAAT TTTTAGATAT AGATATTGGA 
CAAATTAAGC CAACGTACTT AGCTGAACTT TCAAATTACA ATCATGTATT AAAACAAAGA 
AACACTTATC TAAAAACTAC TAATAACGTC GACAAAACTT TTTTAACAGT CCTTGATGAA 
CAATTAGCTG ATTATGGAAG TCGTGTCATT GAACACCGTT TTGATTTTAT CCAAGCCCTA 
AATGATGAAG CGGACAAACA TCACTACATT ATCAGTACTG AGTTAGAACA TTTATCTATT 
CACTACAAAT CGTCAATAGA GTTTACAGAT AAGTCAAGTA TTAGGGAACA TTTTTTAAAC 
CAATTATCTA AAAGCCACTC AAGAGACATC TTTAAGAAAA ACACAAGCAT CGGACCTCAT 
CGTGATGATA TTACTTTCTT TATTAATGAT ATCAATGCTA CTTTTGCTAG CCAAGGGCAA 
CAAAGAAGCC TTATTTTATC ATTGAAATTA GCAGAAATTG AGCTAATAAA AACCGTTACC 
AACGATTATC CGATTCTCTT ACTTGACGAC GTCATGAGTG AACTTGACAA CCATCGTCAA 
CTAAAACTCT TAGAGGGAAT CAAAGAGAAT GTTCAAACAT TTATTACTAC AACAAGTTTA 
GAACATTTAA GTGCTTTACC TGATCAACTC AAAATCTTTA ACGTTAGTGA TGGTACTATT 
AGTATTAATG AAAAAAAAGC AACAGATTAA 

 

Protein sequence

MWIKNISLKH YRNYEEAQVD FSPNLNIFIG RNAQGKTNFL EAIYFLALTR SHRTRSDKEL 
VHFKHHDVQI TGEVIRKSGH LNLDIQLSEK GRITKVNHLK QAKLSDYIGA MTVVLFAPED 
LQLVKGAPSL RRKFLDIDIG QIKPTYLAEL SNYNHVLKQR NTYLKTTNNV DKTFLTVLDE 
QLADYGSRVI EHRFDFIQAL NDEADKHHYI ISTELEHLSI HYKSSIEFTD KSSIREHFLN 
QLSKSHSRDI FKKNTSIGPH RDDITFFIND INATFASQGQ QRSLILSLKL AEIELIKTVT 
NDYPILLLDD VMSELDNHRQ LKLLEGIKEN VQTFITTTSL EHLSALPDQL KIFNVSDGTI 
SINEKKATD