Gene SAG2144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSAG2144 
SymbolmnmA 
ID1014955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus agalactiae 2603V/R 
KingdomBacteria 
Replicon accessionNC_004116 
Strand- 
Start bp2126581 
End bp2127702 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content37% 
IMG OID637317309 
ProducttRNA-specific 2-thiouridylase MnmA 
Protein accessionNP_689129 
Protein GI22538278 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 
TIGRFAM ID[TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.00587025 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGATA ATTCAAACAT TCGTGTCGTT GTAGGCATGA GTGGAGGTGT TGATTCATCA 
GTAACTGCCC TGCTTTTAAA AGAGCAAGGT TATGATGTTA TTGGTGTTTT TATGAAAAAT 
TGGGATGACA CAGATGAATT TGGTGTTTGT ACGGCTACTG AAGATTATAA AGATGTTGCT 
GCTGTTGCTG ATCAGATCGG CATACCATAC TACTCTGTCA ACTTTGAAAA AGAGTATTGG 
GACAGGGTTT TCGAATATTT TTTAGCAGAA TATCGAGCAG GTCGTACGCC AAATCCAGAT 
GTTATGTGTA ATAAGGAAAT TAAATTTAAA GCATTTCTAG ATTATGCGAT GACATTAGGT 
GCTGACTATG TAGCAACAGG TCATTATGCA CAAGTAACAC GTGATGAGAA CGGAATAGTT 
CATATGCTTA GAGGAGCAGA TAATAATAAG GATCAAACTT ATTTTCTAAG TCAATTATCT 
CAGGAGCAAT TGCAAAAAAC GTTATTTCCA CTTGGTCATT TACAAAAACC AGAAGTTCGC 
CGTATAGCTG AAGAAGCAGG ACTTGCGACC GCTAAGAAAA AAGACTCTAC TGGTATTTGT 
TTTATTGGAG AAAAAAATTT CAAGGATTTC CTGGGTCAAT ATTTACCGGC TCAACCAGGT 
CGTATGATGA CTGTTGATGG TCGTGACATG GGTGAACATG CTGGTTTAAT GTATTATACT 
ATTGGTCAAA GAGGGGGCCT TGGTATTGGT GGGCAACATG GTGGAGATAA TAAACCTTGG 
TTTGTAGTTG GAAAGGATTT AAGTAAAAAC ATTCTTTATG TAGGTCAAGG TTTCTATCAT 
GACTCATTGA TGTCAACTAG CTTGACAGCT TCTGAAATCC ACTTTACACG TGATATGCCT 
AATGAATTTA AGCTAGAATG TACAGCTAAG TTCAGATATC GTCAACCTGA CAGTAAAGTT 
ACAGTTTACG TAAAAGGTAA TCAAGCAAGG GTTGTGTTTG ATGATTTACA ACGAGCAATC 
ACACCAGGTC AAGCTGTTGT TTTTTATAAT GAACAAGAAT GTTTAGGCGG TGGGATGATT 
GATCAGGCTT ATCGTGATGA TAAAATCTGT CAATACATTT AA
 
Protein sequence
MTDNSNIRVV VGMSGGVDSS VTALLLKEQG YDVIGVFMKN WDDTDEFGVC TATEDYKDVA 
AVADQIGIPY YSVNFEKEYW DRVFEYFLAE YRAGRTPNPD VMCNKEIKFK AFLDYAMTLG 
ADYVATGHYA QVTRDENGIV HMLRGADNNK DQTYFLSQLS QEQLQKTLFP LGHLQKPEVR 
RIAEEAGLAT AKKKDSTGIC FIGEKNFKDF LGQYLPAQPG RMMTVDGRDM GEHAGLMYYT 
IGQRGGLGIG GQHGGDNKPW FVVGKDLSKN ILYVGQGFYH DSLMSTSLTA SEIHFTRDMP 
NEFKLECTAK FRYRQPDSKV TVYVKGNQAR VVFDDLQRAI TPGQAVVFYN EQECLGGGMI 
DQAYRDDKIC QYI