Gene SAG1993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSAG1993 
Symbol 
ID1014804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus agalactiae 2603V/R 
KingdomBacteria 
Replicon accessionNC_004116 
Strand- 
Start bp1973269 
End bp1974390 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content30% 
IMG OID637317160 
Productphage integrase family site specific recombinase 
Protein accessionNP_688980 
Protein GI22538129 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACAT ATAGACAAAG AGGTAAAAAG AAATTATGGG ATTATAGAAT ATTCAATGAA 
AAAAGTGAGT TAGTTGCTTC TGGTTCAGGT TTTAAGACAA AGCGTGAAGC TATGAATGAA 
GCTATGAGGA TAGAGCAACA AAAGTTATTA GTAAATTCTA TATCTTCTGA TATAACATTG 
TATGATTTGT GGTTTGAATG GTACAGTTTA ATTATAAAGC CTAGCAATCT AGCAGAGACT 
ACAAAGAACA AATATTTTAC AAGAGGTTCT GTTATTCGTA AACTTTTTGG AAATCAGAAA 
GTAAATAAAA TAAAGCATAG TGCGTATCAG AGGAAATTAA ATACGTACGC TGAAAAATAC 
ACTAAAAACC ATGTTAGAAG GTTAAATTCA GATATAAAAA AAGCTATCCA ATTTGCTAAA 
AGAGATGGTG TCTTATTATC TGATTTTACT GATGGAGTTG TCATAGCTGG TAGGAAATTT 
GTTAAGGATG CAGATGATAA ATATCTACAT AGTATTTTTG ATTACAAGAA AGTGATATCT 
TATTTAGAAA ACAATTTGGA TTATTCAAAT AGTATCGTTT ATTATTTATT ACTGGTGCTA 
TTTAAAACAG GTTTACGAGT GGGTGAAGCT TTAGCATTAA CTTGGGATGA TGTTAATTTT 
GAAGATCTAG AAATTAAGAC GTATCGAAGA TTTAGTGGCG ATAAGGGAAC TTTTAGTCCA 
CCTAAAACAA AAACTTCTAT CCGCACTATT CCTATTAGTC AATCTTTAGC ATTAATCTTA 
AGAGATTTGA AGGATGATCA GCAAGTTATG TTGAAAAACT TAAAAATTGT AAACATGAAT 
AATCAAATAT TTTATGACTA TAGATATGGT GTTTCGACAA ATAGTGCGAT AAATAAAAGT 
CTTAAAAATG TTTTAAAAAT ATTAAATATT AATTCAAAAA TGACTGCAAC AGGTGCAAGG 
CATACTTATG GAAGTTACTT ATTAGCAAAA GGTGTAGATA TTTGGGTAGT TGCAAGATTA 
ATGGGTCATA AGGATATTAC ACAGTTACTT GAAACTTATG GTCACGTCTT GACAGAAGTA 
ATAAATAAGG AATATGAAAC GGTCAGAAGT TTAGTATCTT AA
 
Protein sequence
MATYRQRGKK KLWDYRIFNE KSELVASGSG FKTKREAMNE AMRIEQQKLL VNSISSDITL 
YDLWFEWYSL IIKPSNLAET TKNKYFTRGS VIRKLFGNQK VNKIKHSAYQ RKLNTYAEKY 
TKNHVRRLNS DIKKAIQFAK RDGVLLSDFT DGVVIAGRKF VKDADDKYLH SIFDYKKVIS 
YLENNLDYSN SIVYYLLLVL FKTGLRVGEA LALTWDDVNF EDLEIKTYRR FSGDKGTFSP 
PKTKTSIRTI PISQSLALIL RDLKDDQQVM LKNLKIVNMN NQIFYDYRYG VSTNSAINKS 
LKNVLKILNI NSKMTATGAR HTYGSYLLAK GVDIWVVARL MGHKDITQLL ETYGHVLTEV 
INKEYETVRS LVS