Gene SAG1949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSAG1949 
Symbol 
ID1014759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus agalactiae 2603V/R 
KingdomBacteria 
Replicon accessionNC_004116 
Strand
Start bp1938136 
End bp1938945 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content40% 
IMG OID637317116 
ProductPTS system, IIC component 
Protein accessionNP_688937 
Protein GI22538086 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3715] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAATGC CAGCGACGAT GGCAGCTTTA GCTGTATTGA TTTGTTTTGG GGGAAATTAC 
TTAACAGGTC AAAGTATGAT GGAGAGACCA CTTGTAGTTG GTCTTGTAAC AGGAATGCTA
CTAGGTGATA TTAAGGTTGG TATCCTAATG GGAGCCTCCC TAGAAGCGCT ATTTTTGGGA
AACGTTAATA TTGGGGGTGT TATTGCCGCA GAGCCAGTAA CAGCAACAGC GATGGCAACA
ACTTTTACCA TTATTTCAAA CATTGATCAA AAAGCAGCAA TGACTCTAGC TGTTCCGATT
GGAATGTTGG CAGCATTTGT TGTTATGTTT TTGAAAAACG TCTTCATGAA TATCTTTGCA
CCGATGGTGG ATAAAGCTGC AGCCGCAAAC CATCAAGGTA AACTTGTGAT GCTTCACTAT
GGTACATGGA TTATTTACTA TCTCATTATC GCTTCTATTT CTTTCATTGG TATTTTAGTA
GGTAGTGGGC CTGTTAATAG TTTTGTCCAT CATATTCCTC AAAACCTGAT GAATGGTTTG
AGTGCGGCGG GAGGCCTCCT TCCAGCTGTT GGTTTTGCCA TGCTGATGAA ATTATTATGG
ACAAATAAAT TAGCTGTTTT TTACTTGCTT GGTTTTGTTT TAACAGCTTA TTTAAAATTA
CCAGCGGTTG CAGTTGCTGC CCTAGGAGCA GTTATTTGCG TCATTAGTTC ACAACGTGAT
ATAGAATTAG ACGCAATTAC TAGAGGTGCG ATCAGTAAAC AGACAACCTT TGACTCTAAA
GAATCAGAAG AGGAGGACTT CTTCGCATGA
 
Protein sequence
MIMPATMAAL AVLICFGGNY LTGQSMMERP LVVGLVTGML LGDIKVGILM GASLEALFLG 
NVNIGGVIAA EPVTATAMAT TFTIISNIDQ KAAMTLAVPI GMLAAFVVMF LKNVFMNIFA
PMVDKAAAAN HQGKLVMLHY GTWIIYYLII ASISFIGILV GSGPVNSFVH HIPQNLMNGL
SAAGGLLPAV GFAMLMKLLW TNKLAVFYLL GFVLTAYLKL PAVAVAALGA VICVISSQRD
IELDAITRGA ISKQTTFDSK ESEEEDFFA