| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SAG1940 |
|---|
| Symbol | |
|---|
| ID | 1014750 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus agalactiae 2603V/R |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004116 |
|---|
| Strand | - |
|---|
| Start bp | 1926442 |
|---|
| End bp | 1928658 |
|---|
| Gene Length | 2217 bp |
|---|
| Protein Length | 738 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637317107 |
|---|
| Product | GTP pyrophosphokinase family protein |
|---|
| Protein accession | NP_688928 |
|---|
| Protein GI | 22538077 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
|---|
| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.891198 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCAAAG AAATTAATTT AACAGGAGAA GAGGTTGTTG CAATCACATC CCAGTACATG
AGTGAGACGG ATGTTGCTTT TGTAAAATTT GCCTTAAATT ACGCAACCGC AGCTCATTAT
TATCAAGCAA GAAAGTCGGG CGAGCCCTAC ATTATTCATC CAATTCAAGT AGCAGGTATT
CTTGCAGATT TACACCTTGA TGCCGTTACG GTAGCTTGTG GTTTTTTACA TGATGTTGTA
GAAGATACGG AAATTACCCT TGATGAGATT GAAACTGATT TTGGCAAGGA TGTTCGCGAT
ATTATTGACG GCGTAACAAA ATTGGGTAAA GTGGAGTACA AATCTCATGA AGAACAGTTA
GCAGAAAATC ACCGTAAAAT GTTAATGGCT ATGTCTAAGG ATATCCGTGT TATTTTGGTT
AAGCTCGCTG ACCGCTTACA TAATATGAGA ACCCTTAAAC ACCTCAGAAA AGATAAACAA
GAGCGTATTT CACGTGAGAC TATGGAAATA TACGCTCCTT TAGCGCATCG TTTGGGGATT
AGTCGTATCA AGTGGGAATT AGAAGATTTA TCTTTTCGTT ACTTGAATGA GACGGAATTT
TATAAGATTT CTCATATGAT GAGTGAAAAA CGTCGTGAAC GCGAAGAGTT GGTTGATATA
ATTGTCGATA AAATCAGATC CTATACTGAG GAACAGGGTT TATATGGTGA TATTTATGGT
AGACCAAAAC ACATTTATTC TATTTACAGA AAAATGCGTG ATAAAAAGAA ACGCTTTGAT
CAGATTTATG ATTTAATTGC GATACGCTGT ATCATGGAAA CTGCTAGTGA TGTTTATGCC
ATGGTGGGGT ATATCCATGA GTTATGGCGT CCTATGCCAG GAAGGTTTAA AGATTATATT
GCGGCACCAA AGGCCAATGG TTATCAATCT ATTCACACGA CGGTTTATGG ACCTAAAGGG
CCAATTGAAA TTCAGATTCG AACTAAAGAA ATGCATCAAG TTGCCGAGTT TGGTGTTGCA
GCCCATTGGG CCTATAAAAA AGGAATCACC AGTAAGGTTA ATCAAGCAGA GCAATCGGTT
GGTATGGGAT GGATTCAAGA ATTAGTTGAG CTTCAAGATG AATCAAAAGA CGCCAAGGAT
TTTGTTGACT CTGTTAAGGA AGATATCTTT ACAGAACGCA TCTATGTTTT TACCCCAAAT
GGTGCTGTTC AGGAATTGCC AAGGGAATCT GGACCAATTG ATTTTGCTTA TGCTATTCAC
ACGCAAGTTG GAGAAAAAGC TACTGGCGCT AAAGTAAATG GACGTATGGT TCCATTGACT
GCTAAGTTAA AAACAGGAGA TGTTGTTGAG ATTATCACAA ACCCTAATTC ATTTGGACCA
AGTCGTGACT GGATTAAGAT TGTTAAGACC AATAAAGCTC GCAATAAAAT TCGTCAGTTC
TTCAAAAACC AAGATAAAGA AACTTCTATT AATAAAGGTA GAGAATTACT GGTTGATTAT
TTCCAAGAAC AAGGTTATGT GCCTAACAAA TATTTAGATA AGAAACATAT TGAAGAAATC
CTTCCACGTG TCAGTGTTAA AAGTGAGGAA GCTTTGTATG CAGCCGTAGG TTTTGGTGAT
TTGAGTCCGA TTAGTATTTT TAATAAACTG ACGGAAAAAG AACGCCGTGA GGAGGAACGT
GCTAAGGCTA AAGCGGAAGC AGACGAACTT ATTAACGGTG GTGAAATCAA AACCGATAAG
CGTGATGTTC TCAAAGTTAA GAGTGAAAAT GGTGTTATCA TTCAAGGAGC TTCAGGTTTA
TTAATGCGTA TTGCAAAATG TTGTAATCCC GTTCCTGGAG ATCTCATTGA AGGCTATATA
ACTAAAGGTA GAGGCGTGGC TATCCATCGT TCAGATTGTC AAAATTTAAA GAGTCAGGAG
AACTACGAAC AACGTTTGAT TGATGTTGAG TGGGATGATG ATGGATCTAA AAAAGAGTAC
ATGGCTGAAA TCGATATTTA TGGTTTGAAT CGTAGTGGCC TCCTTAATGA TGTTCTTCAA
ACCTTATCAA ATGCAACAAA GCTAGTATCG ACAGTAAATG CACAACCAAC AAAAGATATG
AAATTTGCTA ATATTCATGT TAGCTTTGGA ATTTCAAATT TAGCACAATT GACAACTGTG
GTTGATAAAA TCAAAATTAT CCCAGATGTT TATTCTGTTA AACGTACGAA TGGTTAG
|
|---|
| Protein sequence | MVKEINLTGE EVVAITSQYM SETDVAFVKF ALNYATAAHY YQARKSGEPY IIHPIQVAGI
LADLHLDAVT VACGFLHDVV EDTEITLDEI ETDFGKDVRD IIDGVTKLGK VEYKSHEEQL
AENHRKMLMA MSKDIRVILV KLADRLHNMR TLKHLRKDKQ ERISRETMEI YAPLAHRLGI
SRIKWELEDL SFRYLNETEF YKISHMMSEK RREREELVDI IVDKIRSYTE EQGLYGDIYG
RPKHIYSIYR KMRDKKKRFD QIYDLIAIRC IMETASDVYA MVGYIHELWR PMPGRFKDYI
AAPKANGYQS IHTTVYGPKG PIEIQIRTKE MHQVAEFGVA AHWAYKKGIT SKVNQAEQSV
GMGWIQELVE LQDESKDAKD FVDSVKEDIF TERIYVFTPN GAVQELPRES GPIDFAYAIH
TQVGEKATGA KVNGRMVPLT AKLKTGDVVE IITNPNSFGP SRDWIKIVKT NKARNKIRQF
FKNQDKETSI NKGRELLVDY FQEQGYVPNK YLDKKHIEEI LPRVSVKSEE ALYAAVGFGD
LSPISIFNKL TEKERREEER AKAKAEADEL INGGEIKTDK RDVLKVKSEN GVIIQGASGL
LMRIAKCCNP VPGDLIEGYI TKGRGVAIHR SDCQNLKSQE NYEQRLIDVE WDDDGSKKEY
MAEIDIYGLN RSGLLNDVLQ TLSNATKLVS TVNAQPTKDM KFANIHVSFG ISNLAQLTTV
VDKIKIIPDV YSVKRTNG
|
|---|
| |