Gene SAG1900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSAG1900 
Symbol 
ID1014710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus agalactiae 2603V/R 
KingdomBacteria 
Replicon accessionNC_004116 
Strand- 
Start bp1881248 
End bp1881742 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content34% 
IMG OID637317068 
ProductPTS system, IIB component 
Protein accessionNP_688889 
Protein GI22538038 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3444] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.0261414 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGCAG GACCAAATAT TGTAATGACA CGTGTTGATG AGCGTCTTAT TCATGGACAA 
GGACAACTTT GGGTGAAATT TTTAAGTTGT AATACTGTTA TTGTGGCAAA TGATGATGTC 
TCCAAAGATC ATCTTCAACA AACGTTAATG AAGACGGTGG TGCCAGAATC AATAGCATTG 
CGATTTTTTG ATATTCAAAA AGTTATTGAT ATTATTCACA AGGCCAACCC AGCACAGACG 
ATTTTTATAA TTGTTAAAGA TTTGAAAGAT GTCTATAGAC TTGTAGCAGG GGGCGTCCCA 
ATTAAAGAGA TTAATATTGG AAATATTCAT AATGGAGAAG GTAAAGAGCA GGTAAGTCGC 
TCTATCTTCT TAGGGATGAA GGATAAAGAG ATAATTAGAA AATTAAACCA AGAATATCAC 
ATTGCATTTA ATACTAAAAC AACTCCAACA GGTAACGATG GTGCTGTGGA AGTTAATATT 
TTAGATTATA TTTAG
 
Protein sequence
MAAGPNIVMT RVDERLIHGQ GQLWVKFLSC NTVIVANDDV SKDHLQQTLM KTVVPESIAL 
RFFDIQKVID IIHKANPAQT IFIIVKDLKD VYRLVAGGVP IKEINIGNIH NGEGKEQVSR 
SIFLGMKDKE IIRKLNQEYH IAFNTKTTPT GNDGAVEVNI LDYI