Gene SAG1739 details

Gene Information

• Locus tag: SAG1739
• Symbol: cydC
• ID: 1014548
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Streptococcus agalactiae 2603V/R
• Kingdom: Bacteria
• Replicon accession: NC_004116
• Strand: -
• Start bp: 1734715
• End bp: 1736463
• Gene Length: 1749 bp
• Protein Length: 582 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 637316907
• Product: ABC transporter, ATP-binding protein CydC
• Protein accession: NP_688729
• Protein GI: 22537878
• COG category: [C] Energy production and conversion; [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG4987] ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components
• TIGRFAM ID: [TIGR02868] thiol reductant ABC exporter, CydC subunit

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.257295
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTAAAA TCCCTTTGTT TAAAGAATTA AAGACAGATC AATGGATAAA ACCATTTTTC 
AAACAATATA AAGTTTCCTT AGTAATTGCT CTTTTCCTTG GTTTTATGAC TTTCTTTTCT 
GCCAGTGCTC TTATGTTTAA TTCGGGCTAT CTGATTAGTA AGTCAGCTTC ACTACCGAGT 
AATATTCTTC TAGTATATGT TCCAATTGTA CTAACACGTG CTTTTGGCAT TGGACGTCCT 
GTTTTTCGTT ATATAGAACG CCTAACGAGT CACAATTGGG TATTACGAAT GACTTCACAG 
CTGCGCTTGA AGCTTTACCA TTCCTTAGAA AGCAATGCTA TCTTTATGAA GCGTGATTTT 
CGTTTAGGAG ATGTTATGGG GCTTTTAGCG GAGGATATTA ATTATTTGCA AAATTTGTAT 
CTTAGGACAA TATTTCCAAC GATTATAGCG TGGATATTAT ATAGCTTTAT TATTATTGCA 
ACAGGCTTCT TTTCTCTATG GTTTGCTTTA ATGATGTTGC TTTATTTAGC TATTATGATT 
TTTCTTTTTC CACTTTGGTC GATTTTAGCT AATGGTGCTC GTCAGACTCG TGAAAAAGAA 
TTAAAAAATC ATCTTTATAC TGATTTGACG GATAATGTCT TAGGTATTTC AGACTGGATT 
TTTAGTCAAC GTGGTCAAGA GTACGTCGCC TTGCATGAGC GTTCGGAAAG TGAACTCATG 
GCTGTTCAGA AAAAAATTCG TTCCTTTGAT AATCGTAGAG CTCTTATTGT GGAATTAGTT 
TTTGGCTTTC TAGCTATTTT GGTTATTATT TGGGCTAGTA ATCAGTTTAT TGGTCACAGA 
GGTGGCGAAG CTAACTGGAT TGCAGCATTT GTTCTAACAG TATTTCCCTT GTCAGAGGCA 
TTTGCTGGTT TGTCTGCTGC TGCTCAAGAA ACAAATAAAT ATTCTGATTC AATTCATCGT 
CTTAATGAAT TATCAGAAAC GTATTTTGAA ACAACTCAAA ATCAGTTGCC TAATAAGCCA 
TACGATTTTT CCGTCAAGAA TTTAAGTTTC CAGTATAAGC CACAAGAGAA ATGGGTTTTG 
CATCATTTAG ATTTGGATAT TAAAGAAGGA GAAAAAATTG CTATTTTAGG GCGTAGTGGT 
TCTGGCAAGA GTACCTTAGC CAGTCTACTT CGTGGCGACT TGAAAGCAAG TCAAGGGGAG 
ATTACCCTAG GCGATGCTGA TGTTTCAATA GTTGGTGATT GCATTTCTAA CTATATTGGA 
GTGATACAAC AAGCGCCCTA CCTTTTTAAT ACAACCCTGC TAAATAACAT TCGCATTGGA 
AACCAAGATG CTAGTGAAGA AGATGTATGG AAAGTTCTTG AACGAGTTGG ATTGAAAGAG 
ATGGTCACTG ATTTATCAGA TGGTCTCTAT ACAATGGTTG ATGAAGCTGG ACTTAGGTTT 
TCAGGTGGCG AAAGGCATAG AATTGCTTTG GCTAGAATCT TACTAAAAGA TGTCCCAATT 
GTTATCTTAG ATGAGCCAAC TGTTGGACTT GATCCTATTA CTGAACAAGC CTTACTAAGG 
GTATTTATGA AAGAATTGGA AGGTAAGACC TTAGTTTGGA TTACACATCA CTTAAAAGGT 
ATTGAACATG CTGATCGTAT CTTATTTATA GAAAATGGGC AATTAGAGTT GGAAGGTTCT 
CCTCAAGAAT TGTCTCAAAG TAGCCAACGT TACCGTCAGC TGAAAGCCTC TGATGATGGT 
GATCTATGA 

 

Protein sequence

MFKIPLFKEL KTDQWIKPFF KQYKVSLVIA LFLGFMTFFS ASALMFNSGY LISKSASLPS 
NILLVYVPIV LTRAFGIGRP VFRYIERLTS HNWVLRMTSQ LRLKLYHSLE SNAIFMKRDF 
RLGDVMGLLA EDINYLQNLY LRTIFPTIIA WILYSFIIIA TGFFSLWFAL MMLLYLAIMI 
FLFPLWSILA NGARQTREKE LKNHLYTDLT DNVLGISDWI FSQRGQEYVA LHERSESELM 
AVQKKIRSFD NRRALIVELV FGFLAILVII WASNQFIGHR GGEANWIAAF VLTVFPLSEA 
FAGLSAAAQE TNKYSDSIHR LNELSETYFE TTQNQLPNKP YDFSVKNLSF QYKPQEKWVL 
HHLDLDIKEG EKIAILGRSG SGKSTLASLL RGDLKASQGE ITLGDADVSI VGDCISNYIG 
VIQQAPYLFN TTLLNNIRIG NQDASEEDVW KVLERVGLKE MVTDLSDGLY TMVDEAGLRF 
SGGERHRIAL ARILLKDVPI VILDEPTVGL DPITEQALLR VFMKELEGKT LVWITHHLKG 
IEHADRILFI ENGQLELEGS PQELSQSSQR YRQLKASDDG DL