Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SAG1624 |
Symbol | csrS |
ID | 1014433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus agalactiae 2603V/R |
Kingdom | Bacteria |
Replicon accession | NC_004116 |
Strand | - |
Start bp | 1626271 |
End bp | 1627776 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637316793 |
Product | sensor histidine kinase CsrS |
Protein accession | NP_688615 |
Protein GI | 22537764 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0265731 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAAATA AAAAAGATCA GTTTATAGGG GTAAAACAAC CTCTGTCAAA AAAATTATCG CAATTAGTTT TTATCTTATT TTTTAGCCTA TTTACAGTAT TTTCTGTTTT AGTTTATACT TCGGCAACAA GATACGTCCT TCACAGGGAA AAAATTAATG TCGGTAGGTC ATTAGAAAAA ACTAGAGTTC GTTTGTCGCA AGCGAACTCT AGTTTGACAT CCGATGATAT TTTAGAGATC CTGTACAACC AGGTTTTTGC GGATGACATC TATCCTCATA AGCGTCAAAA TGGAATTGTT AGAACGGGCG AGTCAATCGA TAGTATTCTT TATGTTAATC AAGAAATGAC CCTATACGAT GTCAACAGGA AACCAGTTTT TTCTACACTG AGAACGGGTA TGCCAACTAT TGGTAAATCC ATGGGAAAAG TTATCATCTC TAAAGTTGCA GATATGGAAG GTTTTGTTGG TACAAAAGCA ATCTACTCTC AAAAAACAGG ACAGTTGCTT GGATACGTTC AAATTTTCTA TAATTTAGGT CGTTATTATA GTATGAGGCA AAACATCATT GTTTTCTTGA TTATGATGGA AGTTTTAGGG ACTGTTTTAG CCTTGGTCGT TATTAATAGT GCTACTAAGC GTATTGTTCG TCCGGTTAAA AATTTACACG ACTTAATGCA TCAGATATCT GAAAATCCTA GTAATTTAGA AATTAGAAGT AAGGTCCGTT CAGAAGACGA AATTGGAGAA TTGTCTAGGA TTTTTGATGG GATGTTGGAT CAGTTGGAAG ACTATACTCG TCGACAATCA CAATTCATTA GTGATGTTAG TCATGAATTA AGAACGCCTG TCGCTGTTGT AAAGGGTCAT ATTGGTTTAT TACAACGTTG GGGGAAAGAT GATCCAGAAA TTCTTGAAGA AAGTTTAGCA GCGGCATACC ATGAGGCAGA TCGTATGTCC TTAATGATTA ATGACATGTT AAATATGATT CGCGTCCAAG GAAGCTTGGA ACTTCATCAA GATGAAGTGA CAGATTTATC AAGCTCTATA TCAGTTGTTA TTGAAAATTT CCGTATTTTG AGAGAAGATT TTCAATTTAT TTTTGAAAAT AATATTTCAG ATATCGTTTG GGGAAAGATA TATAAGATAC ATTTTGAGCA AGCTCTCATG ATCTTAATTG ATAACGCTAT CAAGTACTCT CCTAGTTATA AAGAAGTCAG TGTTGTTTTA TCAGTAGACA ATGATTTTGC GACAGTAGTT GTAAAAGATA AAGGAGAAGG TATCTCAGAT GAAGATATTG AGTTTATCTT TGATCGTTTT TATCGAACTG ATAAATCACG TAACAGAGAA AGTACACAAG CTGGTTTAGG TATCGGGCTT TCAGTGTTTA AACAAATTAT GGATGCTTAC CATTTAAAGG TGGATATTAA AAGTGAACTA AATCAAGGGA CTGAATTCAT TGTTCGCATT CCTATAAAAA AATTTGAAGA AACTAAAGAA ATATAA
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Protein sequence | MKNKKDQFIG VKQPLSKKLS QLVFILFFSL FTVFSVLVYT SATRYVLHRE KINVGRSLEK TRVRLSQANS SLTSDDILEI LYNQVFADDI YPHKRQNGIV RTGESIDSIL YVNQEMTLYD VNRKPVFSTL RTGMPTIGKS MGKVIISKVA DMEGFVGTKA IYSQKTGQLL GYVQIFYNLG RYYSMRQNII VFLIMMEVLG TVLALVVINS ATKRIVRPVK NLHDLMHQIS ENPSNLEIRS KVRSEDEIGE LSRIFDGMLD QLEDYTRRQS QFISDVSHEL RTPVAVVKGH IGLLQRWGKD DPEILEESLA AAYHEADRMS LMINDMLNMI RVQGSLELHQ DEVTDLSSSI SVVIENFRIL REDFQFIFEN NISDIVWGKI YKIHFEQALM ILIDNAIKYS PSYKEVSVVL SVDNDFATVV VKDKGEGISD EDIEFIFDRF YRTDKSRNRE STQAGLGIGL SVFKQIMDAY HLKVDIKSEL NQGTEFIVRI PIKKFEETKE I
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