Gene SAG1424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSAG1424 
SymbolrfbD 
ID1014233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus agalactiae 2603V/R 
KingdomBacteria 
Replicon accessionNC_004116 
Strand
Start bp1435876 
End bp1436730 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content38% 
IMG OID637316599 
ProductdTDP-4-dehydrorhamnose reductase 
Protein accessionNP_688421 
Protein GI22537570 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1091] dTDP-4-dehydrorhamnose reductase 
TIGRFAM ID[TIGR01214] dTDP-4-dehydrorhamnose reductase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000208207 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTTAA TTACAGGGGC AAACGGGCAA TTAGGTAGTG AATTACGTCA CCTTTTAGAC 
GAACGAACTC AAGAGTATGT TGCTGTTGAT GTAGCTGAAA TGGATATTAC AAATGCCGAG
ATGGTGGACA AAGTCTTTGA AGAGGTGAAG CCATCTTTAG TTTACCATTG TGCAGCTTAC
ACAGCTGTTG ATGCGGCAGA AGATGAAGGA AAAGAGCTAG ACTTTGCAAT CAATGTCACT
GGTACAGAGA ATGTCGCTAA GGCTGCTGCT AAACATGATG CAACACTTGT TTACATTTCG
ACGGACTACG TGTTTGATGG TGAAAAACCA GTGGGGCAAG AATGGGAAGT AGATGATCTG
CCTGATCCCA AAACAGAGTA CGGTCGTACA AAACGTATGG GTGAAGAGTT AGTTGAAAAA
TATACTTCAA AATTCTATAC CATTCGCACA GCGTGGGTAT TTGGTAACTA TGGTAAAAAC
TTTGTCTTTA CGATGCAAAA CCTTGCAAAA ACACACAAAA CTCTAACTGT TGTTAACGAC
CAACATGGAC GACCAACATG GACACGTACT TTGGCTGAGT TTATGACTTA TTTAGCTGAA
AATCAAAAAG ATTTTGGTTA CTATCATTTA TCAAATGATG CTAAAGAAGA TACAACATGG
TATGATTTTG CGGTTGAAAT CTTAAAAGAC ACAGATGTGG AGGTTAAGCC TGTTGATTCT
AGTCAATTCC CAGCAAAAGC AAAACGTCCT TTAAATTCAA CTATGAGTTT GGAAAAAGCG
AAAGCAACAG GATTTGTGAT TCCTACTTGG CAAGATGCTT TAAAAGAGTT CTACAAGCAG
GAAGTTAAAA AATAA
 
Protein sequence
MILITGANGQ LGSELRHLLD ERTQEYVAVD VAEMDITNAE MVDKVFEEVK PSLVYHCAAY 
TAVDAAEDEG KELDFAINVT GTENVAKAAA KHDATLVYIS TDYVFDGEKP VGQEWEVDDL
PDPKTEYGRT KRMGEELVEK YTSKFYTIRT AWVFGNYGKN FVFTMQNLAK THKTLTVVND
QHGRPTWTRT LAEFMTYLAE NQKDFGYYHL SNDAKEDTTW YDFAVEILKD TDVEVKPVDS
SQFPAKAKRP LNSTMSLEKA KATGFVIPTW QDALKEFYKQ EVKK