| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SAG1360 |
|---|
| Symbol | |
|---|
| ID | 1014169 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus agalactiae 2603V/R |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004116 |
|---|
| Strand | - |
|---|
| Start bp | 1370609 |
|---|
| End bp | 1371319 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 637316536 |
|---|
| Product | ABC transporter, ATP-binding protein |
|---|
| Protein accession | NP_688358 |
|---|
| Protein GI | 22537507 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00540247 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACAACTA ATCGAAAAGA ACTGATTAGA TTGCATCAGA TTGTTAAAAG TTATCAAAAT
GGGGATCAAA AACTTCAAGT CTTAAAGAAC ATTGATTTGA CGGTTTATGA AGGTGAATTT
CTTGCAATCA TGGGGCCATC TGGTTCAGGG AAATCCACAC TAATGAATAT TATTGGCTTG
TTGGATTCTC CAACTTCAGG AGATTATAGT TTAAATGGTA AACGTGTCGA AGAACTAAGT
CAAACAAAAT TAGCTCAAGT TCGAAATAAG GAAATTGGTT TTGTCTTTCA ACAATTTTTC
TTGTTATCTA AACTAACGGC TTTACAAAAT GTTGAATTAC CCTTAATTTA TGCGGGTGTA
CCTCCTAAAA AGCGTAAAAA TTTAGCAAAA CAATTTTTAG ATAAAGTTGA ATTAAGAGAG
CGTATGAACC ATCTGCCAAC AGAATTATCT GGGGGACAGA AGCAACGTGT AGCAATCGCG
CGTGCTTTGG TGAATAGCCC ATCTATTATT CTAGCAGATG AGCCGACTGG TGCCTTGGAT
ACAAAGACGG GTGAGCAAAT TATGCAGTTC CTAACGGAAT TAAATCAAGA AGGTAAAACC
ATTATCATGG TAACTCATGA ACCAGAAATC GCCGATTATG CGACTCGTAA AATTGTTATT
CGTGATGGCG AAATTACAGC AGATACTACT GATAGTATTA GAATTGATTA A
|
|---|
| Protein sequence | MTTNRKELIR LHQIVKSYQN GDQKLQVLKN IDLTVYEGEF LAIMGPSGSG KSTLMNIIGL
LDSPTSGDYS LNGKRVEELS QTKLAQVRNK EIGFVFQQFF LLSKLTALQN VELPLIYAGV
PPKKRKNLAK QFLDKVELRE RMNHLPTELS GGQKQRVAIA RALVNSPSII LADEPTGALD
TKTGEQIMQF LTELNQEGKT IIMVTHEPEI ADYATRKIVI RDGEITADTT DSIRID
|
|---|
| |