| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SAG1348 |
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| Symbol | lacR-1 |
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| ID | 1014155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Streptococcus agalactiae 2603V/R |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004116 |
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| Strand | - |
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| Start bp | 1358254 |
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| End bp | 1358997 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 637316522 |
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| Product | lactose phosphotransferase system repressor |
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| Protein accession | NP_688346 |
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| Protein GI | 22537495 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTAAAGT CAAAGAGAAA AGAAATTATC TTATCACGAC TTGAGCAAAA TAAGAGTGTT
ACTTTAGATG AATTAACGTC TATCTTAGAG ACTTCTGAAT CTACAGTTCG CAGGGATTTA
GATGAACTTG AATCTGCAGG TTTTTTAAAA AGGGTGCATG GTGGTGCTGA ATTACCATAC
TCACTTGGCC AGGAATTAAG TAATCAAGAA AAAGCTATCA AAAACGTTCA AAAAAAATTG
GATATTGCTA GACAAACTGC AAAGCTGATA GCAAAGCAAG ATGTTATATT TATTGATGCC
GGAACTACGA CAGAATTATT AATTGATTTT CTCCCTCACG AGCAATTAAC GGTGGTGACG
AATTCTATTC ATCATGCTGC AAAGTTAGTT GATAGAGGGA TAAAAACAAT CATTATCGGA
GGAGCGGTTA AACATTCAAC AGATGCTAGT ATTGGCCAGG TAGCCATTAA TCAGATTAGG
CAGATAACGG TTGACAAAGC TTTTCTGGGG ATGAATGGTA TAGATGAAGT TTATTTAACT
ACACCAGATT TAGAAGAAGC TGCTATTAAA GAAGCTATTA TTAATAATAG TCAACAAACC
TTTATTCTAA TGGATTCATC TAAAATTGGA CAAGTTACAT TTGCTAAAGT GAAAGAGATA
AATGACATTA ATTTAGTAAC TAATAAGACT GATTCAGAAC TTATGACAAT AATAAAAGAG
AAAATGAAGG TGATTCAAGT ATGA
|
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| Protein sequence | MLKSKRKEII LSRLEQNKSV TLDELTSILE TSESTVRRDL DELESAGFLK RVHGGAELPY
SLGQELSNQE KAIKNVQKKL DIARQTAKLI AKQDVIFIDA GTTTELLIDF LPHEQLTVVT
NSIHHAAKLV DRGIKTIIIG GAVKHSTDAS IGQVAINQIR QITVDKAFLG MNGIDEVYLT
TPDLEEAAIK EAIINNSQQT FILMDSSKIG QVTFAKVKEI NDINLVTNKT DSELMTIIKE
KMKVIQV
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