Gene SAG1338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSAG1338 
Symbol 
ID1014145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus agalactiae 2603V/R 
KingdomBacteria 
Replicon accessionNC_004116 
Strand
Start bp1347270 
End bp1349009 
Gene Length1740 bp 
Protein Length579 aa 
Translation table11 
GC content37% 
IMG OID637316512 
ProductABC transporter, ATP-binding/permease protein 
Protein accessionNP_688336 
Protein GI22537485 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATATA TTTGGTCTTA TTTGAAAAGG TACCCCAATT GGTTATGGCT TGATTTACTA 
GGAGCTATGC TTTTTGTGAC GGTTATCCTA GGAATGCCCA CAGCCTTAGC GGGTATGATT
GATAATGGCG TTACAAAAGG TGATCGGACT GGAGTTTATC TGTGGACGTT CATCATGTTT
ATATTTGTTG TACTAGGTAT TATTGGGCGT ATTACGATGG CTTACGCATC TAGTCGCTTA
ACGACAACAA TGATTAGAGA TATGCGTAAT GATATGTATG CTAAGCTTCA AGAATACTCC
CATCATGAAT ATGAACAGAT AGGTGTATCT TCACTAGTGA CACGTATGAC AAGCGATACT
TTTGTTTTGA TGCAATTTGC TGAAATGTCT TTACGTTTAG GCCTAGTAAC TCCTATGGTA
ATGATTTTTA GCGTGGTTAT GATACTAATT ACGAGTCCAT CTTTAGCTTG GCTTGTAGCG
GTTGCGATGC CTCTTTTGGT AGGAGTTATT TTATATGTAG CTATAAAAAC AAAACCTTTA
TCTGAAAGAC AACAGACTAT GCTTGATAAA ATCAATCAAT ATGTTCGTGA AAATTTAACA
GGGTTACGCG TTGTTAGGGC CTTTGCAAGA GAGAATTTTC AATCACAAAA ATTTCAAGTC
GCTAACCAAC GTTACACAGA TACTTCAACT GGTCTTTTTA AATTAACAGG GCTAACAGAA
CCACTTTTCG TTCAAATTAT TATTGCAATG ATTGTGGCTA TCGTTTGGTT TGCTTTGGAT
CCCTTACAAA GAGGTGCTAT TAAAATAGGG GATTTAGTTG CTTTTATCGA ATATAGCTTC
CATGCTCTCT TTTCATTTTT GCTATTTGCC AATCTTTTTA CTATGTATCC TCGTATGGTG
GTATCTAGCC ATCGTATTAG AGAGGTAATG GATATGCCGA TTTCTATTAA TCCTAATACC
GAAGGTGTTA CGGATACGAA ACTTAAAGGG CATTTAGAAT TTGATAATGT AACATTCGCT
TATCCAGGAG AAACAGAGAG TCCCGTTTTG CATGATATTT CTTTTAAAGC TAAGCCTGGA
GAAACAATTG CTTTTATTGG TTCAACAGGT TCAGGAAAAT CTTCTCTTGT TAATTTGATT
CCACGTTTTT ATGATGTGAC ACTTGGAAAA ATCTTAGTAG ATGGAGTTGA TGTAAGAGAT
TATAACCTTA AATCACTTCG CCAAAAGATT GGATTTATCC CCCAAAAAGC TCTTTTATTT
ACAGGGACAA TAGGAGAGAA TTTAAAATAT GGAAAAGCTG ATGCTACTAT TGATGATCTT
AGACAAGCGG TTGATATTTC TCAAGCTAAA GAGTTTATTG AGAGTCACCA AGAAGCCTTT
GAAACGCATT TAGCTGAAGG TGGGAGCAAT CTTTCTGGGG GTCAAAAACA ACGGTTATCC
ATTGCTAGGG CTGTTGTTAA AGATCCAGAT TTATATATTT TTGATGATTC ATTTTCTGCT
CTCGATTATA AGACAGACGC TACTTTAAGA GCGCGTCTAA AAGAAGTAAC CGGTGATTCT
ACGGTTTTGA TAGTTGCTCA AAGGGTGGGT ACGATTATGG ATGCTGATCA GATTATTGTC
CTTGATGAAG GCGAAATTGT CGGTCGTGGT ACCCACGCTC AATTAATAGA AAATAATGCT
ATTTATCGTG AAATCGCTGA GTCACAACTG AAGAACCAAA ACTTATCAGA AGGAGAGTGA
 
Protein sequence
MAYIWSYLKR YPNWLWLDLL GAMLFVTVIL GMPTALAGMI DNGVTKGDRT GVYLWTFIMF 
IFVVLGIIGR ITMAYASSRL TTTMIRDMRN DMYAKLQEYS HHEYEQIGVS SLVTRMTSDT
FVLMQFAEMS LRLGLVTPMV MIFSVVMILI TSPSLAWLVA VAMPLLVGVI LYVAIKTKPL
SERQQTMLDK INQYVRENLT GLRVVRAFAR ENFQSQKFQV ANQRYTDTST GLFKLTGLTE
PLFVQIIIAM IVAIVWFALD PLQRGAIKIG DLVAFIEYSF HALFSFLLFA NLFTMYPRMV
VSSHRIREVM DMPISINPNT EGVTDTKLKG HLEFDNVTFA YPGETESPVL HDISFKAKPG
ETIAFIGSTG SGKSSLVNLI PRFYDVTLGK ILVDGVDVRD YNLKSLRQKI GFIPQKALLF
TGTIGENLKY GKADATIDDL RQAVDISQAK EFIESHQEAF ETHLAEGGSN LSGGQKQRLS
IARAVVKDPD LYIFDDSFSA LDYKTDATLR ARLKEVTGDS TVLIVAQRVG TIMDADQIIV
LDEGEIVGRG THAQLIENNA IYREIAESQL KNQNLSEGE