Gene SAG1323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSAG1323 
Symbol 
ID1014130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus agalactiae 2603V/R 
KingdomBacteria 
Replicon accessionNC_004116 
Strand- 
Start bp1328981 
End bp1329976 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content37% 
IMG OID637316497 
Productisopentenyl pyrophosphate isomerase 
Protein accessionNP_688321 
Protein GI22537470 
COG category[C] Energy production and conversion 
COG ID[COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases 
TIGRFAM ID[TIGR02151] isopentenyl-diphosphate delta-isomerase, type 2 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.911087 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAATC GAAAAGATGA TCACATAAAA TATGCTCTTA AATATCAGTC GCATTATAAT 
AGTTTTGACG ATATTGAGTT AATACATTCA TCCTTACCAA AATATAATGT CAACGATATC 
GATTTATCAA CACATTTTGC TGGTCAAAGC TTTGAATTTC CTTTTTATAT CAATGCTATG 
ACAGGCGGTA GTGAAAAAGG GAAAGCAGTC AATCATAAAT TGGCACAGGT TGCTCAAGCT 
ACAGGGATTG TTATGGTGAC AGGTTCATAT TCGGCAGCTC TCAAAAACGA TGAAGATGAT 
TCCTACCCAA CAACAGACTT GTATCCTGAT TTAAAACTGG CGACAAATAT AGGGTTAGAC 
AAGCCTGTAC CAGCAGCAGA GTCAACCGTT AAGGCTATGA ACCCCATTTT TTTACAAGTT 
CATGTTAATG TGATGCAAGA ACTTTTGATG CCTGAAGGAG AGCGTGAATT TCACATGTGG 
CGTTCTCACT TAAAAGAATA CGTCGACAAT ATCCAATGCC CACTTATTTT AAAAGAGGTT 
GGTTTTGGGA TGGATTTACA ATCAATAAAG GATGCTTACG ATATAGGTAT CACAACTGTA 
GATATTTCGG GGCGTGGGGG GACTAGTTTT GCTTACATCG AAAATCAACG TGGACGCGAC 
CGTTCGTATC TCAATACCTG GGGGCAAACA ACAGCTCAAT CCTTAATAAA CGCTCAATCT 
ATGATGGACA AAATGGATAT CCTAGCATCT GGTGGCATTC GTCATCCTTT AGATATGGTA 
AAATGTTTAG TGTTGGGTGC TAAAGCTGTT GGACTTTCTA GAACAGTTTT AGAATTAGTT 
GAGCGTTATC CTGTAGATGA TGTTATTGCA ATTCTCAATT CTTGGAAAGA AGATTTAAGA 
ATGATAATGT GTGCACTGAA TTGTAAAAAA ATAACTGATT TACGACAAGT CAATTATATA 
TTGTATGGTC AATTGAAGGA AGCCAATGCT AAATGA
 
Protein sequence
MTNRKDDHIK YALKYQSHYN SFDDIELIHS SLPKYNVNDI DLSTHFAGQS FEFPFYINAM 
TGGSEKGKAV NHKLAQVAQA TGIVMVTGSY SAALKNDEDD SYPTTDLYPD LKLATNIGLD 
KPVPAAESTV KAMNPIFLQV HVNVMQELLM PEGEREFHMW RSHLKEYVDN IQCPLILKEV 
GFGMDLQSIK DAYDIGITTV DISGRGGTSF AYIENQRGRD RSYLNTWGQT TAQSLINAQS 
MMDKMDILAS GGIRHPLDMV KCLVLGAKAV GLSRTVLELV ERYPVDDVIA ILNSWKEDLR 
MIMCALNCKK ITDLRQVNYI LYGQLKEANA K