Gene SAG1319 details

Gene Information

• Locus tag: SAG1319
• ID: 1014126
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Streptococcus agalactiae 2603V/R
• Kingdom: Bacteria
• Replicon accession: NC_004116
• Strand: +
• Start bp: 1326049
• End bp: 1326693
• Gene Length: 645 bp
• Protein Length: 214 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 637316493
• Product: hemolysin III, putative
• Protein accession: NP_688317
• Protein GI: 22537466
• COG category: [R] General function prediction only
• COG ID: [COG1272] Predicted membrane protein, hemolysin III homolog
• TIGRFAM ID: [TIGR01065] channel protein, hemolysin III family

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTATCA AATTAAGTCC TCAACTTTCC TTTGGCGAAG AGCTTGCAAA TAGTATCACT 
CACGCTGTAG GAGCTTTGCT TATGCTAATC CTATTACCAA TCACCGCTGT CTATAGTCAC 
AACCACTTCG GATTACAAGC AGCACTTGGT ACCTCAATAT TCGTCACTTC TTTATTTTTG 
ATGTTTTTAT CATCAAGTAT TTACCACTCC ATGACTTATA ACAGTCTTCA AAAATATGTT 
CTACGCATGA TTGATCACTC TATGATTTAT ATTGCTATTG CAGGTAGTTA TACTCCTGTC 
GCATTGTCAC TTATTGGCGG CTGGTTAGGA TATCTCATCA TTTTTTTACA ATGGGGGATT 
ACATTATTTG GTATCCTTTA TAAAATCTTC GCTCCCAAAA TCAATGATAA ATTTAGCCTT 
GTACTTTACC TCATTATGGG ATGGCTGGTT ATCTTTATTT TCCCTGCTAT TATCACAAAA 
ACTGGACCAG CTTTTTGGGG ATTACTCTTG GCTGGTGGTA TTTGCTATAC TATCGGTGCA 
CTCTTTTATG CTCGCAAACG TCCTTATGAT CACATGATTT GGCACCTTTT TATTCTATTA 
GCTTCTATTT TACAATACAT TGGAATTGTC TACTTCATGC TATAA 

 

Protein sequence

MSIKLSPQLS FGEELANSIT HAVGALLMLI LLPITAVYSH NHFGLQAALG TSIFVTSLFL 
MFLSSSIYHS MTYNSLQKYV LRMIDHSMIY IAIAGSYTPV ALSLIGGWLG YLIIFLQWGI 
TLFGILYKIF APKINDKFSL VLYLIMGWLV IFIFPAIITK TGPAFWGLLL AGGICYTIGA 
LFYARKRPYD HMIWHLFILL ASILQYIGIV YFML