| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SAG1283 |
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| Symbol | ssp-5 |
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| ID | 1014090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Streptococcus agalactiae 2603V/R |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004116 |
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| Strand | - |
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| Start bp | 1291338 |
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| End bp | 1296233 |
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| Gene Length | 4896 bp |
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| Protein Length | 1631 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637316459 |
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| Product | agglutinin receptor |
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| Protein accession | NP_688283 |
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| Protein GI | 22537432 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4372] Uncharacterized protein conserved in bacteria with the myosin-like domain |
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| TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAAAA CATGTAATCA TCACTTTCTT GTCAATCAGG AAAAAGGCGA GAAACACGTC
TTTCGCAAGA GTAAAAAATA TCGCACTCTA TGTTCCGTTG CCCTTGGAAC CATGGTGACG
GCTGTTGTTG CTTGGGGAGG AACGGTTGCA CATGCCGATG AAGTTACAAC TTCAGTTGAC
ACCACCATTC AACGAACGGA GAATCCAGCC ACAAATTTAC CAGAAGCACA ACCAAACCCT
GTATCTGAAC AAACTGAAAG TATGGCATCA ACTGGACAAT CTAACGGTGC GATTGCTGTT
ACCGTACCAC ATGATACGGT AACACAAGCA GTTGAAGAAG CAAAGGCTGA AGGTGTTTCT
ACGGTTGAAG ATAGTCCAAT GGATTTAGGA AATACAAGAT CTGCGGTAGA AACCAACCAA
CAAATTTCAA AAGCAGATGC AGATACCCAA AAACAGGTTG AGACTATTAA TGAAGTCACT
AAAACCTACA AAGCTGATAA AGCGACATAC GAATCGAATA AAGCTCGCAT CGAACAGGAA
AATAAGGAGC TGTCACAGGC CTACGAGGGG GCCAACCAAA CTGGTAAAGA GACAAATGCT
TGGGTTGATA CTAAAGTCAA TGACCTAAAA GCTCGGTATG CAGATGCTGA TGTGACAGTA
AAAGAACAAG TAGTTTCATC AGGAAATGGG ACATCTGTCC TTGACTATAC AAACTATGGC
AAGGCTGTTG AAACCATTCA ATCAACTAAC GAACAAGCTG TAGCGGATTA TCTAACAAAG
AAAACAAAGG CAGATGATAT TGTTGCGAAA AATCAGGCCA TTCAAAAAGA AAATGAAGCT
GGACTTGCTA ATGCAAAGGC AGATAATGAA GCCATTGAAA GGCGTAATCA GGCTGGTCAA
GCAGCTGTTG ATGCTGAAAA CCGTGCAGGT CAAGCCGCAG TAGATCAAGC TAATCAGGAG
AAACAACAAT TAGTTTCAGA TCGTGCAGCC GAGATTGAAG CTATTACAAA ACGTAATAAA
GAAAAAGAAG CCGCAGCCAG AAAAGAGAAT GAAGCGATTG ATGCCTATAA TACCAAAGAA
ATGGAACGCT ATCAACGTGA CTTGGCCGAG ATTTCAAAAG GTGAAGAAGG TTATATTTCT
GAAGCCCTTG CTCAAGCCCT CAATCTCAAC AACGGTGAAC CCCAAGCACA ACATGGGGCC
ATTACCCGAA ATCCTGATCA GATCATTTCA ACTGGCGATG CTTTGCTGGG AGGCTACTCA
AGAATATTGG ATTCAACAGG ATTCTTTGTC TATGACATGT TCAAAACAGG TGAGACTCTT
AGTTTTAACT ATCAAAATCT TCAACATGCA CGATTTGATG GTAAAAAGAT TAGTCGTGTG
ACTTACGATA TTACCAACCT TGTATCACCA GCTGGAACCA ATGCCGTGAA ATTGGTTGTG
CCAAATGATC CAACCGAGGG TTTTATTGCC TATCGAAATG ACGGAAACGG TGACTGGCGA
ACAGACAAGA TGGAGTTTCG TGTAGTTGCC AAGTATTACT TGGAAGACGG TTCACAAGTT
ACCTTCTCCA AAGAAAAGCC AGGAGTCTTC ACACACTCTT CCCTCAATCA TAATGACATT
GGTTTAGAAT ATGTCAAAGA TTCATCTGGG AAATTTGTGC CGATTAATGG TTCAACTGTT
CAAGTGACTA ATGAAGGTCT AGCACGTTCT TTGGGTTCCA ACCGTGCAAG TGATTTGAAT
TTACCTGAGG AATGGGATAC CACATCAAGT CGTTATGCTT ATAAAGGAGC TATTGTCTCA
ACAGTTACAT CAGGTAATAC CTACACAGTA ACCTTTGGCC AAGGCGATAT GCCACAGAAT
GTTGGCTTGT CATACTGGTT CGCCTTAAAT ACCCTACCAG TGGCACGTAC AGTAACACCA
TATAGTCCCA AACCTCATGT AACGGTGGAA CTTGAACCCA TTCCAGAACC TATTACGGTA
ACACCAGATA TCTATACACC AAAAACATTT ACACCAGAAA AGCCTGTAAC TTTCACACCA
AAGCCTTTGG ATGAAGTAGT GCAGCCTAGT CTAACTTTGA CCAAGGTAAC CTTGCCTGTC
AAACCTATTC CAAAAGAACT TCCAACGCCA CCACAAGTAC CAACTGTCCA TTATCATGCG
TACCGTTTGA CGACAACTTC AGAGATTATG AAAGAAGTGG TCAATAGTGA CCAAGCTAAT
CTTCATGAGA AAACTGTCGC AAAAGATTCA ACGGTGATTT ATCCCTTAAC AGTTGATGCC
TTATCGCCCA ATCGTGCCCA AACGACTAGT CTCATTTTTG AGGACTACTT GCCTGCTGGT
TACCTATTTG ATAAGGAAAC AACACAAAAA GAGAATGGAA ACTATGTCCT TAGCTTTGAT
GAGACTAAGA ATTTTGTGAC CTTAACCGCA AAGGAAAACT TGTTGCAGGA GGTAAATAAA
GATTTAACTC AGGTTTATCA ATTGACCGCC CCAAAACTCT ATGGTTCTGT TCAAAATGAT
GGGGCAACCT ATTCCAATAG TTACAAACTC CTTTTGAACA AGGGTACAAC CAATGCTTAC
ACAGTCACTT CAAATGTTGT AACGGTTCGT ACACCAGGTG ATGGGGAGAC AACCACGCTC
ATTACACCAG ATAAAAACAA TGAAAATGCG GATGGTGTCC TCATTAATGA CACGGTCGTA
GCCCTTGGTA CAACCAACCA CTATCGTTTG ACTTGGGATT TGGACCAGTA TAAGGGAGAT
CGTTCTGCTA AAGAGACAAT TGCACGAGGC TTCTTCTTTG TGGACGATTA CCCAGAGGAA
GTGCTTGATG TGGTGGAAAA TGGCACGGCT ATCACAACCC TTGACGGTCA GAAGGTATCA
GGAATTACAG TTAAAAACTA TGCTTCCCTA AATGAAGCCC CTAAAGACCT TCAAGATAAA
TTGGCTCGTG CTAAGATTAC ACCGACAGGT GCCTTTCAAG TCTTTATGCC GGATGACAAC
CAAGCCTTTT ATGACCAGTA TGTTCAAACA GGAACTTCTT TAGCTCTTTT GACCAAAATG
ACGGTTAAAG ATAGTCTCTA TGGTCAGACA AAGACCTATA CAAACAAGGC TTATCAAGTT
GATTTCGGCA ATGGCTATGA AACCAAGGAA GTGACCAACA CCCTTGTTTC ACCAGAACCC
AAGAAACAAA ACCTAAACAA GGATAAAGTG GATATCAACG GGAAGCCCAT GCTAGTGGGA
ACTCAAAATC ACTATACTCT TTCATGGGAC TTGGACCAAT ACCGAGGGAT TAAAGCAGAC
AACTCTCAGA TTGCACAAGG TTTTTACTTT GTGGATGATT ATCCAGAAGA AGCTTTATTG
CCAGATGAAG CAGCTATTCA GTTTGTCACA TCTGATGGCA AAACAGTTTC AGGAATCACG
GTGAAGTCTT ATTCTCAATT ATTAGAAGCT CCTAAAACGC TACAAGCAGC CTTTTCCAAA
CAAAAAATTC AGCCTAAAGG AGCTTTTCAA GTTTTCATGC CTGAGGACCC ACAAGCCTTT
TTTGAATCTT ATGTGACCAA GGGGGAGAAT ATTACCATTG TCACTCCAAT GACGGTTTTG
GAAACCATGC TTAATTCAGG GAAGTCTTAT GAAAACGTGG CTTATCAGGT GGACTTTGGG
CAAGCCTATG AAACCAATAC GGTGACCAAT TTTGTCCCTA AAGTAACTCC ACATAAGTCT
AATACCAATC AAGAAGGTAT TTCAATTGAT GGAAAGACTG TTCTTCCGAA TACGGTCAAT
TATTACAAAA TTGTCTTGGA TTACAGTCAA TACAAGGATA TGGTCGTGAC GGATGATGTT
CTTGCCAAGG GATTTTACAT GGTAGACGAT TACCCAGAAG AAGCCCTTAC CCTAAATCCT
GATGGCATTC AAGTTTTGGA TAAGGATGGC AATCGTGTAT CTGGTATCTC TGTCAGCACC
TACGCTAGTT TGTCAGAAGC TCCGAAAGTT GTTCAAGATG CCATGGCTAA ACGTCAGTTT
ACACCTAAAG GAGCCATTCA AGTTCTTAGT AGCGATGATC CAAAAGTCTT TTATGATACC
TATGTGAAGA CTGGTCAAAC CTTAGTTGTC ACGCTTCCGA TGACGGTAAA AAATGAGTTG
ACCAAAACAG GTGGTCAGTA TGAAAATACA GCCTATCAAA TTGATTTTGG CTTGGCCTAT
GTCACGGAAA CAGTGGTTAA TAATGTTCCA AAATTAGACC CACAAAAAGA TGTGGTGATC
GACTTGTCTC ATAAAGATGC CAGCCTTGAC GGGAAAGAAG TGGCCTTGCA TCAAACCTTT
AACTATCGCT TGGTTGGAGC GATGATTCCA AGCAATCGTG CGACTGATTT ATTTGAATAT
GGTTTTGAAG ATAACTATGA TGAAAAGCAT GATGAGTATA ATGGTGTTTA TCGCAGCTAT
CTGATGACGG ATGTCATCCT CAAAGACGGT TCTGTCTTAA AAGAGGGGAC AGAAGTCACG
AAATACACCT TGCAACAGGT AGATACAGAA AATGGCCTCG TGTCAATTTC ATTTGATAAA
TCCTTCTTAG AGACTGTCTC TGATGATTCA GCCTTTCAGG CAGATGTTTA CCTTCAAATG
AAACGGATTG CGGCTGGTCA GGTGGAGAAT ACCTATCTCC ATACAGTGAA TGGCTATGTC
ATTAGCTCAA ATACAGTTGT AACACATACA CCTCAACCTG AAGAACCAAG TCCAAATCAA
CCCACTCCAC CTCAACCACC AATTGAGACT ATTGAACCGC CTGTTCCAGC AAGTATTTTG
CCAAATACAG GGGAACAGGA ATCCCTTTTG GGCTTGATTG GAGCTGGTAT TCTACTTGGT
ACGGCTTATG GACTGAAGAA AAAGGAGGAG AAGTAG
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| Protein sequence | MTKTCNHHFL VNQEKGEKHV FRKSKKYRTL CSVALGTMVT AVVAWGGTVA HADEVTTSVD
TTIQRTENPA TNLPEAQPNP VSEQTESMAS TGQSNGAIAV TVPHDTVTQA VEEAKAEGVS
TVEDSPMDLG NTRSAVETNQ QISKADADTQ KQVETINEVT KTYKADKATY ESNKARIEQE
NKELSQAYEG ANQTGKETNA WVDTKVNDLK ARYADADVTV KEQVVSSGNG TSVLDYTNYG
KAVETIQSTN EQAVADYLTK KTKADDIVAK NQAIQKENEA GLANAKADNE AIERRNQAGQ
AAVDAENRAG QAAVDQANQE KQQLVSDRAA EIEAITKRNK EKEAAARKEN EAIDAYNTKE
MERYQRDLAE ISKGEEGYIS EALAQALNLN NGEPQAQHGA ITRNPDQIIS TGDALLGGYS
RILDSTGFFV YDMFKTGETL SFNYQNLQHA RFDGKKISRV TYDITNLVSP AGTNAVKLVV
PNDPTEGFIA YRNDGNGDWR TDKMEFRVVA KYYLEDGSQV TFSKEKPGVF THSSLNHNDI
GLEYVKDSSG KFVPINGSTV QVTNEGLARS LGSNRASDLN LPEEWDTTSS RYAYKGAIVS
TVTSGNTYTV TFGQGDMPQN VGLSYWFALN TLPVARTVTP YSPKPHVTVE LEPIPEPITV
TPDIYTPKTF TPEKPVTFTP KPLDEVVQPS LTLTKVTLPV KPIPKELPTP PQVPTVHYHA
YRLTTTSEIM KEVVNSDQAN LHEKTVAKDS TVIYPLTVDA LSPNRAQTTS LIFEDYLPAG
YLFDKETTQK ENGNYVLSFD ETKNFVTLTA KENLLQEVNK DLTQVYQLTA PKLYGSVQND
GATYSNSYKL LLNKGTTNAY TVTSNVVTVR TPGDGETTTL ITPDKNNENA DGVLINDTVV
ALGTTNHYRL TWDLDQYKGD RSAKETIARG FFFVDDYPEE VLDVVENGTA ITTLDGQKVS
GITVKNYASL NEAPKDLQDK LARAKITPTG AFQVFMPDDN QAFYDQYVQT GTSLALLTKM
TVKDSLYGQT KTYTNKAYQV DFGNGYETKE VTNTLVSPEP KKQNLNKDKV DINGKPMLVG
TQNHYTLSWD LDQYRGIKAD NSQIAQGFYF VDDYPEEALL PDEAAIQFVT SDGKTVSGIT
VKSYSQLLEA PKTLQAAFSK QKIQPKGAFQ VFMPEDPQAF FESYVTKGEN ITIVTPMTVL
ETMLNSGKSY ENVAYQVDFG QAYETNTVTN FVPKVTPHKS NTNQEGISID GKTVLPNTVN
YYKIVLDYSQ YKDMVVTDDV LAKGFYMVDD YPEEALTLNP DGIQVLDKDG NRVSGISVST
YASLSEAPKV VQDAMAKRQF TPKGAIQVLS SDDPKVFYDT YVKTGQTLVV TLPMTVKNEL
TKTGGQYENT AYQIDFGLAY VTETVVNNVP KLDPQKDVVI DLSHKDASLD GKEVALHQTF
NYRLVGAMIP SNRATDLFEY GFEDNYDEKH DEYNGVYRSY LMTDVILKDG SVLKEGTEVT
KYTLQQVDTE NGLVSISFDK SFLETVSDDS AFQADVYLQM KRIAAGQVEN TYLHTVNGYV
ISSNTVVTHT PQPEEPSPNQ PTPPQPPIET IEPPVPASIL PNTGEQESLL GLIGAGILLG
TAYGLKKKEE K
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