Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SAG1247 |
Symbol | |
ID | 1014054 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus agalactiae 2603V/R |
Kingdom | Bacteria |
Replicon accession | NC_004116 |
Strand | - |
Start bp | 1256680 |
End bp | 1257879 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637316425 |
Product | phage integrase family site specific recombinase |
Protein accession | NP_688249 |
Protein GI | 22537398 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.357571 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAACAA AAAGTAGTAA AAAATACAAA GGTGTTTATT GTGATAATAA GGGAAAGATA TTTTATCAGA TTGATCTTGG AATCGACCCA GTAACTGGCA AAAGGGTACA AAAGAAAGCT AGAAAAAATC AATATGGTAA AACCTTTGAA ACAATGAAAG AAGCATATGA CGAATTAGTT CGTATAAAAT ATGAATTTGC CAACAAAGTC AGTTTAGAAA ATTACAATAT GACTTTTGAA AACTATATGA ACAAAATTTA TTTAAGAGCA TATAAGCAAA AGGTTCAGTC TGTGACATAT AAGACGGCTC TTCCTCATCA TAAACTTTTT ATTCAATATT TTGGTTTAAA GCCATTAAAA GCAATAACTC CTAGAGATTG CGAAGCTTTT AGATTGCATA TCATAGAGAA TTATTCTGAA AACTATGCGA AAAATTTATG GTCAAGGTTT AAAGCTTGTA TGGGTTATGC AGAAAGACTT GGCTATATTT CAAATATGCC TTGTAAAGCA TTAGATAATC CTAGAGGTAA ACATCCAGAA ACTCCATTTT GGACCTATGC GGAGTTTCAG ACATTTATCA AATCATTTGA CTTACATGAT TATGAAGAAT TGCAACGATT TACTGCCATC TGGTTATATT ATATGACAGG TGTACGAGTG AGCGAAGGTT TATCTTTATG TTGGGAGGAT ATTGATTTTG ATAAAAAATT TCTAAAGGTA CATACAACCT TAGAGAAAGA TGAAAATGGT AATTGGTATC GTAAAGACCA AACAAAGACT CCAGCAGGTG AACGACTTAT TGAATTGGAT GATATTACTA TTGAAGTACT TCAAGTTTGG CGAAAAAATC AGTTTGCAAA TCAAGATACA GATTTTATCA TTTCAAGATT TGGAGATCCT TTTTGCAAAT CAACCATTTG TCGCATCATC AAACGGAAAG CTCAACAGGT AGGAGTTCCA GTAATTACAG GAAAAGGTCT CAGACATAGC CATGCATCCT ATCTAATCAA TGTCTTGAAA AAAGATATTT TATATGTAGC CAGACGTATG GGACATGCCG ATAAATCAAC AACTTTGAAT ACTTACAGTC ACTGGTTTAA TGCTTTAGAT AAAACAGTTT CTGAAGAAAT CACACAAAAT ATCAAAAGTG CAGGATTGGA TTCAATTTTA TGCCAAAATT CCTGCCAAAC TTCAAATTAA
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Protein sequence | MATKSSKKYK GVYCDNKGKI FYQIDLGIDP VTGKRVQKKA RKNQYGKTFE TMKEAYDELV RIKYEFANKV SLENYNMTFE NYMNKIYLRA YKQKVQSVTY KTALPHHKLF IQYFGLKPLK AITPRDCEAF RLHIIENYSE NYAKNLWSRF KACMGYAERL GYISNMPCKA LDNPRGKHPE TPFWTYAEFQ TFIKSFDLHD YEELQRFTAI WLYYMTGVRV SEGLSLCWED IDFDKKFLKV HTTLEKDENG NWYRKDQTKT PAGERLIELD DITIEVLQVW RKNQFANQDT DFIISRFGDP FCKSTICRII KRKAQQVGVP VITGKGLRHS HASYLINVLK KDILYVARRM GHADKSTTLN TYSHWFNALD KTVSEEITQN IKSAGLDSIL CQNSCQTSN
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