| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SAG1224 |
|---|
| Symbol | |
|---|
| ID | 1014031 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus agalactiae 2603V/R |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004116 |
|---|
| Strand | - |
|---|
| Start bp | 1234712 |
|---|
| End bp | 1236052 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 637316407 |
|---|
| Product | MATE efflux family protein |
|---|
| Protein accession | NP_688231 |
|---|
| Protein GI | 22537380 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0534] Na+-driven multidrug efflux pump |
|---|
| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000144559 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATCAAA CTCAGACAAA TAAGGAAAAA TTTGTTTTAT TTTTGAAATT ATTTATCCCA
GTATTGATTT ATCAATTTGC TAATTTTTCA GCTACTTTTA TTGATTCGGT TATGACTGGA
CAGTATAGTC AGCTACATTT GGCAGGTGTG TCAACTGCTA GTAATTTATG GACTCCGTTT
TTCGCTTTAT TAGTAGGTAT GATTTCAGCA TTAGTACCAG TAGTTGGTCA ACATTTGGGT
AGAGGAAATA AAGAACAAAT TCGCACAGAA TTTCATCAAT TTCTATATTT AGGTTTGATA
CTGTCCTTAA TATTATTTTT AATCATGCAA TTTATTGCTC AACCTGTCTT GGGGAGTTTG
GGTTTAGAAG ATGAAGTTCT AGCAGTTGGT CGTGGTTATT TAAATTATAT GTTGATTGGA
ATCATGCCGC TGGTGTTGTT TAGCATTTGC CGTTCATTCT TTGATGCATT GGGGTTAACA
AGGTTATCTA TGTATCTGAT GCTTTTAATT CTACCCTTTA ATTCATTTTT TAATTATATG
CTTATCTACG GTAAATTTGG TATGCCTAGA CTAGGAGGTG CGGGGGCAGG TCTTGGAACT
TCTTTAACTT ATTGGGCTAT TTTTATTGTT ATTATTATTG TGATGTCACT TCATCCTCAA
ATTAAAACAT ATCATATATG GACTCTGGAA AGAATAAAAG CTCCTTTGAT TATTGAAGAT
ATTCGATTGG GATTACCGAT TGGTTTACAA ATTTTTGCAG AAGTTGCAAT TTTTGCAGTA
GTAGGCTTAT TCATGGCAAA ATTTTCTTCA ATCATTATTG CAGCACATCA GGCTGCTATG
AATTTTTCAT CATTAATGTA TGCCTTTCCT TTAAGTATTT CCACTGCTCT AGCTATTACA
ATATCGTTTG AAGTAGGGGC AGAGCGCTTT CAGGACGCAA ACACTTATAG TAGGATAGGA
CGCTTAACAG CGGTAGGGAT TACATCAGGA ACCTTACTAT TTTTATTTCT ATTTCGTGAG
AATGTAGCAG CAATGTATAA TAGTGACCCT CACTTTGTCG CTATTACAGC TCAATTCCTA
ACTTATAGTC TCTTTTTCCA GTTTGCAGAT GCTTATGCAG CTCCTGTACA GGGGATTTTA
CGAGGCTATA AGGATACAAC AAAACCATTT ATGATCGGTG CGGGCTCTTA TTGGTTATGT
GCTTTGCCAT TAGCGGTTAT CTTAGAAAAA AATAGCCAGT TAGGTCCTTT TGCCTATTGG
ATTGGTTTAA TCACAGGTAT TTTTGTTTGT GGTCTATTTC TAAACCAACG TCTGCAAAAG
ATTAAGAAGT TGTATTATTA A
|
|---|
| Protein sequence | MYQTQTNKEK FVLFLKLFIP VLIYQFANFS ATFIDSVMTG QYSQLHLAGV STASNLWTPF
FALLVGMISA LVPVVGQHLG RGNKEQIRTE FHQFLYLGLI LSLILFLIMQ FIAQPVLGSL
GLEDEVLAVG RGYLNYMLIG IMPLVLFSIC RSFFDALGLT RLSMYLMLLI LPFNSFFNYM
LIYGKFGMPR LGGAGAGLGT SLTYWAIFIV IIIVMSLHPQ IKTYHIWTLE RIKAPLIIED
IRLGLPIGLQ IFAEVAIFAV VGLFMAKFSS IIIAAHQAAM NFSSLMYAFP LSISTALAIT
ISFEVGAERF QDANTYSRIG RLTAVGITSG TLLFLFLFRE NVAAMYNSDP HFVAITAQFL
TYSLFFQFAD AYAAPVQGIL RGYKDTTKPF MIGAGSYWLC ALPLAVILEK NSQLGPFAYW
IGLITGIFVC GLFLNQRLQK IKKLYY
|
|---|
| |