| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SAG1178 |
|---|
| Symbol | deoD |
|---|
| ID | 1013985 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus agalactiae 2603V/R |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004116 |
|---|
| Strand | - |
|---|
| Start bp | 1181577 |
|---|
| End bp | 1182287 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637316363 |
|---|
| Product | purine nucleoside phosphorylase |
|---|
| Protein accession | NP_688187 |
|---|
| Protein GI | 22537336 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0813] Purine-nucleoside phosphorylase |
|---|
| TIGRFAM ID | [TIGR00107] purine-nucleoside phosphorylase, family 1 (deoD) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAATCC ATATTGAAGC AAAACAAGGT GAAATTGCAG ATAAAATTTT ACTTCCAGGA
GATCCACTCC GTGCGAAATT TATTGCCGAG AATTTTTTAG AAGATGCGGT GTGTTTTAAC
ACAGTTCGCA ATATGTTTGG TTATACAGGT ACCTATAAAG GACATCGTGT TTCTGTTATG
GGAACTGGTA TGGGTATGCC TTCAATTTCA ATTTATGCTC GCGAACTAAT TGTTGATTAT
GGGGTTAAAA CATTGATTCG CGTAGGAACA GCAGGTGCTA TTAATCCTGA TATCCATGTT
CGTGAACTTG TTTTGGCACA AGCAGCAGCA ACAAATTCTA ATATTATCCG TAATGATTGG
CCTGAATTTG ATTTTCCGCA AATTGCTGAT TTTAAACTTT TGGATAAAGC TTATCACATC
GCAAAGGAAA TGGATATTAC AACTCATGTA GGCAGTGTAT TATCTTCAGA CGTGTTTTAT
TCAAACCAAC CAGATCGTAA TATGGCCTTG GGTAAACTAG GTGTTCATGC TATTGAGATG
GAAGCAGCAG CTCTCTACTA TCTTGCAGCT CAACACAATG TTAATGCTCT TGCTATGATG
ACGATTTCAG ATAACTTGAA TAATCCAGAA GAAGATACAA GTGCAGAAGA GCGTCAAACA
ACATTTACTG ATATGATGAA AGTTGGGCTC GAAACACTTA TTTCTGAATG A
|
|---|
| Protein sequence | MSIHIEAKQG EIADKILLPG DPLRAKFIAE NFLEDAVCFN TVRNMFGYTG TYKGHRVSVM
GTGMGMPSIS IYARELIVDY GVKTLIRVGT AGAINPDIHV RELVLAQAAA TNSNIIRNDW
PEFDFPQIAD FKLLDKAYHI AKEMDITTHV GSVLSSDVFY SNQPDRNMAL GKLGVHAIEM
EAAALYYLAA QHNVNALAMM TISDNLNNPE EDTSAEERQT TFTDMMKVGL ETLISE
|
|---|
| |