| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SAG1175 |
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| Symbol | cpsA |
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| ID | 1013982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Streptococcus agalactiae 2603V/R |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004116 |
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| Strand | - |
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| Start bp | 1178207 |
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| End bp | 1179664 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 637316360 |
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| Product | capsular polysaccharide biosynthesis protein CpsA |
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| Protein accession | NP_688184 |
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| Protein GI | 22537333 |
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| COG category | [K] Transcription |
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| COG ID | [COG1316] Transcriptional regulator |
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| TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTAATC ATTCGCGCCG TCACCAAAAG AAACACTCAC ATACACCTCT ACGGGTGATT
AATTTATTTC TTTTGGTGAT TTTTATTTTG TTAAGTGTAG TCTCATTATT TCTTATGTAT
CGTCACCATT TTTTGGCATT TAGACACCTG AACGTCATTT ATGGAGTTGT AATTGTTTTA
ATCATTTTAG TAAGTTTATT TCTTTGTATT AAGAATAAAG CTAGAATTTT TACAACTATA
ATTTTAGTAT TAGCTTCTAT TTTCGTTGCT ACTACTTTAT ATGGATTTAA GTCAACCATT
GATTTGACAA ATAATCTAAA TAAAACTGCT TCATACTCTG AAATTGAGAT GAGTGTAGTT
GTACCAAAAG ATTCTAAAAT AACCAATATA GAAGCTGTCA GCAAATTAGC CGCACCAGTT
AAAAACGATA CTTCAAATAT TACTGATTTG ATAGAACATA TAAAATCAGA AAAAGGAATC
TCTATTACAC CACAAAAAAC AGATTCTTAC CAGGATGCAT ACAATAGAAT TAAAAGTGGT
GATAGTCAGG CTATGGTTTT AAATAATGCT TATGTTAGCT TAATTGAACT TAGCACCCCT
GATTTTAAAT CGCAGATAAA AACGATTTAT ACTTACAAAA TTAAGAAAAA AATTAATCGT
AAAAATACTA ATCATAAAGA AGGGGTATTT AATATCTATA TTAGCGGTAT TGATACTTTT
GGCTCTATAT CAACAGTATC AAGATCTGAT GTAAATATTA TTATGACGGT TAATACCAAT
ACCCACAAAG TATTGTTAAC GACAACACCA CGAGATGCCT ATGTAAAAAT TCCAGATGGT
GGGGGCAATC AATATGATAA ATTAACCCAT GCAGGTTTGT ATGGCGTTGA GACATCAATG
AAAACACTTG AAAACCTTTA CGACATCAAC CTTGATTATT ATGCTAGAAT TAATTTTTCA
TCATTTTTAA AATTAATAGA CCTCTTGGGA GGAGTGACAG TTTATAACGA TCAAGCTTTT
ACAAGTAAAC ATGGTAATTT TGACTTCCCT GTTGGTCAAG TAACATTGAA TTCTGAGCAG
GCTTTGGGCT TTGTTAGAGA ACGTTATTCT CTACAAGGAG GCGATAACGA TAGAGGTAGA
AATCAAGAAA AAGTGATTGC AGCTATTATA AATAAGTTAG CTTCTAGTCA GTCAGTAACA
AAATTAAATA GCATTACCTC ACAGCTCCAA ACGTCCGTTC AAACTAATAT GACTATTGAT
AACATTAATG ATTTGATTAA CAATCAATTG TCAACTGGAC AACGCTTCAC TGTCGAGTCA
CAAGCATTAA CTGGTCATGG TTCAACGGGT GAACTCCCTT CATATGCAAT GCCAGGAGCT
CAACTTTATA TGATGTCAAT TGATCAATCT AGCTTATCTA ATGCAAAATC AAAAATTAAG
AACACAATGG AGGAATAA
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| Protein sequence | MSNHSRRHQK KHSHTPLRVI NLFLLVIFIL LSVVSLFLMY RHHFLAFRHL NVIYGVVIVL
IILVSLFLCI KNKARIFTTI ILVLASIFVA TTLYGFKSTI DLTNNLNKTA SYSEIEMSVV
VPKDSKITNI EAVSKLAAPV KNDTSNITDL IEHIKSEKGI SITPQKTDSY QDAYNRIKSG
DSQAMVLNNA YVSLIELSTP DFKSQIKTIY TYKIKKKINR KNTNHKEGVF NIYISGIDTF
GSISTVSRSD VNIIMTVNTN THKVLLTTTP RDAYVKIPDG GGNQYDKLTH AGLYGVETSM
KTLENLYDIN LDYYARINFS SFLKLIDLLG GVTVYNDQAF TSKHGNFDFP VGQVTLNSEQ
ALGFVRERYS LQGGDNDRGR NQEKVIAAII NKLASSQSVT KLNSITSQLQ TSVQTNMTID
NINDLINNQL STGQRFTVES QALTGHGSTG ELPSYAMPGA QLYMMSIDQS SLSNAKSKIK
NTMEE
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