Gene SAG1110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSAG1110 
SymbolpotB 
ID1013914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus agalactiae 2603V/R 
KingdomBacteria 
Replicon accessionNC_004116 
Strand
Start bp1118595 
End bp1119389 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content35% 
IMG OID637316292 
Productspermidine/putrescine ABC transporter, permease protein 
Protein accessionNP_688119 
Protein GI22537268 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1176] ABC-type spermidine/putrescine transport system, permease component I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAA CCTCTAGTCT ATTTTCAATT CCTTATATGG CTTGGTTATT CTTATTTGTA 
TTAGCACCTG TTGCTTTGAT TGCTTGGAAC TCGTTCTTTG ATATTAATGG GCACTTTACT
TTAGCTAATT ACCAGACGTT TTTTAGCTCA GGAACCTATC TTAAAATGAG CTTTAACTCG
GTCCTATATG CAGGCATCGT TAGTTTCATA ACGCTTTTGA TTAGCTATCC AGCTGCTTAT
TTGCTTACAA AATTAAAACA CAAGCAATTA TGGCTAATGC TAGTTATTTT GCCAACATGG
ATTAATCTTT TGTTAAAAGC CTATGCTTTT ATGGGGATAT TTGGTCAACA AGGGGGAATT
AACGCCTTCT TAACCTTTAT AGGTATCGGC CCAAAACAGA TTCTATTTAC AGACTTTTCA
TTTCTTTTTG TAGCAGCTTA CATTGAATTA CCGTTTATGT TATTACCCAT TTTTAATGCC
TTGGATGATA TTGATCAAAA TCTCATTTAT GCAAGTGATG ACTTGGGTGC AAATGCATGG
CAAACTTTTC AGAAGGTTAT ATTTCCTTTA TCTCTGAATG GTGTAAGAGC AGGTGTACAG
TCTGTCTTTA TCCCTAGTTT GAGTCTCTTT ATGCTTACGC GTCTTATTGG TGGTAATCGA
GTTATCACTT TAGGGACAGC CATAGAACAA CATTTTTTAA TCACACAAAA TAAAGGTATG
GGCTCAACCA TAGGGGTTAT TTTAATTTTA GTGATGGTTG CTATTATGTG GTTAACAAAG
GAGAGGAAAG CATGA
 
Protein sequence
MKKTSSLFSI PYMAWLFLFV LAPVALIAWN SFFDINGHFT LANYQTFFSS GTYLKMSFNS 
VLYAGIVSFI TLLISYPAAY LLTKLKHKQL WLMLVILPTW INLLLKAYAF MGIFGQQGGI
NAFLTFIGIG PKQILFTDFS FLFVAAYIEL PFMLLPIFNA LDDIDQNLIY ASDDLGANAW
QTFQKVIFPL SLNGVRAGVQ SVFIPSLSLF MLTRLIGGNR VITLGTAIEQ HFLITQNKGM
GSTIGVILIL VMVAIMWLTK ERKA