| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SAG1088 |
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| Symbol | |
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| ID | 1013892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Streptococcus agalactiae 2603V/R |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004116 |
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| Strand | - |
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| Start bp | 1095548 |
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| End bp | 1096888 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 637316270 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | NP_688097 |
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| Protein GI | 22537246 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily
[TIGR01167] LPXTG-motif cell wall anchor domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTAAAA AGGGATGGCG TATTATGCCT GCCATAATTA CAACGGCTAT ATTAGGTTTT
TCAGGGATTC TTATTGAAAC ATCTATGAAT GTCACTTTTC CGCTTTTGAT GAAAGAATTT
GGGGTTAACC CCGCTGTTAT TCAATGGGTG ACAACAGGAA ATTTGTTAGC TGTTGCTGTG
ACTGTGCCTT TGTCAGCATT TATGATTAAA AATTTATCAG AGAGACAAAT TTTTACATTG
GCAAATGTGC TTTTTTTATC TGGTGTTTTA ATTGATAGCT TTGCCCCTAA TTTAGCTATA
TTGTTAGTAG GGAGAGTTTT GCAAGGTGTT GGGACAGGAT TAGCCCTCCC TTTATTGTTT
CATATCATTC TTACACAAAT CCCGATGGAG CGTAGAGGAC TAATGATGGG AGTAGCTGCT
ATGGTCACAC TTTTAGCACC GGCAGTTGGA CCTACTTATG GCGGTGTTAT TTCAGGAATG
TTAGGATGGA AGATGATTTT TATGCTTCTG GCACCAATAC TTATCATATC CACCTTTATA
GGTTTGGCTT CTATTCCCAA ACGTCAAGTA AGAATTAATG ATAAACTCAA TTTTCCTGCC
TTTATCAGTT TAGGTATTGG CTTGGCAACC CTTCTTTTAG CTATTGAAAA GATGTCTATT
TTTTACTTAT TAGTAGCTAT TGTTAGTTTT GTTATTTTTT ACTATTTAAA TAAACAGCTA
GAATTTTTGA ATTTGAATGT TTTTAAAGAT AAAGATTTCT CAATCTTATT GTATGGCGTC
CTGGCTTTTC AAATGATTCC TCTAGCACTT TCGTTCTTAT TACCTAACCT CTTGCAACTT
GTTTTACATC AAACTTCAAC CAAAGCTGGT TTGTTTATGT TTCCAGGTGC AATAGCAGTA
GTTTTTTTAT CCCCTTTTGC AGGTTATCTC CTGGATAAAA TTGGTGCATT TAAGCCAATT
ATGATAGGCA TCTCCCTTTC TTTGATAGGT TTAATTGGTA CAGCTATATT CATTCCTGCG
AAGTCTGTTG TAGTACTTTT AGCCTTTGAT ATCCTTACTA AAATTGGTAT GGGGATTGGA
GCAAGTAATA TGGTTACGAC AGCTTTAACA AAACTAAAGC CAGCACAGTC AGCGGATGGT
AATAGTATCT TGAATACACT ACAACAATTT GCGGGAGCTT TTGCAACCGC AGTAGCCTCA
CAAATTTTTA CCATCGGACA AGTAGCTATT CCGAAAAATG GAGCTATAAT TGGTAGTCAA
TTTGCAGTTC TATTCGTTAT CGTTGTTGTT ATCTTAGCTA TTGTAGGATT AACTTATCTT
CGAAAAAGAA AAGCAATATA A
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| Protein sequence | MTKKGWRIMP AIITTAILGF SGILIETSMN VTFPLLMKEF GVNPAVIQWV TTGNLLAVAV
TVPLSAFMIK NLSERQIFTL ANVLFLSGVL IDSFAPNLAI LLVGRVLQGV GTGLALPLLF
HIILTQIPME RRGLMMGVAA MVTLLAPAVG PTYGGVISGM LGWKMIFMLL APILIISTFI
GLASIPKRQV RINDKLNFPA FISLGIGLAT LLLAIEKMSI FYLLVAIVSF VIFYYLNKQL
EFLNLNVFKD KDFSILLYGV LAFQMIPLAL SFLLPNLLQL VLHQTSTKAG LFMFPGAIAV
VFLSPFAGYL LDKIGAFKPI MIGISLSLIG LIGTAIFIPA KSVVVLLAFD ILTKIGMGIG
ASNMVTTALT KLKPAQSADG NSILNTLQQF AGAFATAVAS QIFTIGQVAI PKNGAIIGSQ
FAVLFVIVVV ILAIVGLTYL RKRKAI
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