Gene SAG1070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSAG1070 
Symbol 
ID1013874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus agalactiae 2603V/R 
KingdomBacteria 
Replicon accessionNC_004116 
Strand
Start bp1078475 
End bp1080208 
Gene Length1734 bp 
Protein Length577 aa 
Translation table11 
GC content35% 
IMG OID637316252 
ProductABC transporter, ATP-binding/permease protein 
Protein accessionNP_688079 
Protein GI22537228 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00802304 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCAA GTCATCCTAA AAAGATACAA AAAAAGCTTG TTCAAGATCT TCTTTCTAAA 
AAAAGCTTAG TAGGAATGGC ATTATTAGGG ACGGTTGTAC AAGTTTGCCT CACTGTTTAT
TTGCCTGTTC TAATTGGACA AGCGGTAGAC GTTGTATTAT CGCCTCATTC TATGATATTA
TTGTTACCTA TAATGTGGAA GATGATTGCA GTCATTTTAG CAAATACTAT TATTCAATGG
ATTAATCCTC TGCTCTATAA CCGCTTAATT TTTCATTATG TTGCTTCTTT AAGAAAGGCT
GTAATGGAAA AGTTGAATCT ATTGCCTATA GCTTACCTTG ATAAACGTGG CATAGGTGAC
TTGATTAGTC GTGTGACTAC CGATACGGAG CAATTATCAA ATGGTTTATT AATGGTTTTT
AACCAGTTCT TTGTTGGTTT ATTAACTATT ATAGTTACTA TTTTTAGTAT GGCAAAGATT
GATTTATTAA TGCTTTTTTT GGTATTATTT CTGACGCCTT TATCACTCTT TCTAGCCCGC
TTTATTGCTA AAAAGAGTTA TCACTTATAT CAAAATCAAA CGGCATCACG AGGACGACAA
ACTCAATTCA TTGAAGAGAT GGTGAGTCAA GAAAGCCTTA TTCAAGCATT CAGTGCGCAA
GAAGAAAGTA GTGATCATTT TAGGACTATT AATCAAGAGT ATGCTAACTT TTCTCAATCA
GCAATTTTTT ATTCTTCAAC TGTCAATCCA TCAACCCGAT TTATCAATAG TTTGATTTAT
GGCTTCTTAG CTGGGATTGG TGCCCTTCGC ATTATGTCAG GGGCTTTTAG TGTTGGTCAA
TTAATCACTT TCTTAAATTA TGTCAATCAA TATACTAAGC CATTTAATGA CATCTCTTCC
GTCCTGTCTG AGATGCAAAG TGCTCTGGCG TGTGCAGAAC GCCTTTACTC TATTTTAGAA
GAATCGTCAC CAAATATAAC AGGTACAGAA AAACTTGATT CATCAACGGT CAAAGGTCAA
ATCGATTTTA AAAACGTTGT TTTTGGTTAT AATAAATCAA AACTACTATT GAATGGTATT
AATTTACACA TTCCAGCAGG AGCTAAGGTC GCTATTGTAG GACCAACAGG TGCTGGGAAG
TCTACTTTAA TCAATTTAAT AATGCGTTTC TATGAAGTTG ACGGGGGAAA TATCCTTTTA
GATTGTAAGC CTATTACTGA TTATGAGCCA TCACAATTAA GGCAAGAAAT TGGAATGGTA
TTACAAGAAA CGTGGTTAAA AAGTGCTACG ATTCACGATA ACATTGCATA TGCCAATCCT
AAAGCTAGCC GTGAAGAAGT GATAGAGGCT GCAAAAGCAG CTAATGCAGA TTTCTTTATC
AAACAATTAC CGAATGGATA TGATACGTAT TTAGAAGATG CTGGAGATTC GTTATCACAG
GGGCAATGTC AGCTATTGAC AATTGCTCGT ATTTTTCTTA AATTACCTAG AATATTGATA
TTAGATGAGG CGACATCGTC TATAGATACT CGTACTGAAG TTCTTGTTCA AGAAGCATTC
CAAATGTTGA TGAAGGGGAG AACAAGCTTT ATTATTGCAC ATCGCTTATC TACCATTCAA
ACGGCAGATA TTATTTTAGT TATGGTATCT GGTGAAATTG TAGAAGTGGG TAACCACTCT
GAATTAATGG CTCAAAAAGG TATTTATTAT CAAATGCAAA ATGCACAAAA GTAG
 
Protein sequence
MKASHPKKIQ KKLVQDLLSK KSLVGMALLG TVVQVCLTVY LPVLIGQAVD VVLSPHSMIL 
LLPIMWKMIA VILANTIIQW INPLLYNRLI FHYVASLRKA VMEKLNLLPI AYLDKRGIGD
LISRVTTDTE QLSNGLLMVF NQFFVGLLTI IVTIFSMAKI DLLMLFLVLF LTPLSLFLAR
FIAKKSYHLY QNQTASRGRQ TQFIEEMVSQ ESLIQAFSAQ EESSDHFRTI NQEYANFSQS
AIFYSSTVNP STRFINSLIY GFLAGIGALR IMSGAFSVGQ LITFLNYVNQ YTKPFNDISS
VLSEMQSALA CAERLYSILE ESSPNITGTE KLDSSTVKGQ IDFKNVVFGY NKSKLLLNGI
NLHIPAGAKV AIVGPTGAGK STLINLIMRF YEVDGGNILL DCKPITDYEP SQLRQEIGMV
LQETWLKSAT IHDNIAYANP KASREEVIEA AKAANADFFI KQLPNGYDTY LEDAGDSLSQ
GQCQLLTIAR IFLKLPRILI LDEATSSIDT RTEVLVQEAF QMLMKGRTSF IIAHRLSTIQ
TADIILVMVS GEIVEVGNHS ELMAQKGIYY QMQNAQK