| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SAG1005 |
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| Symbol | topA |
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| ID | 1013809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Streptococcus agalactiae 2603V/R |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004116 |
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| Strand | - |
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| Start bp | 1014001 |
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| End bp | 1016121 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 637316189 |
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| Product | DNA topoisomerase I |
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| Protein accession | NP_688016 |
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| Protein GI | 22537165 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA
[COG0551] Zn-finger domain associated with topoisomerase type I |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00429671 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAACTA CGACAAAAAC GTCGACCAAA AAAACAAGTA AAAAAAAATC AGCTACTGCT
AAAAAAAATC TAGTTATTGT GGAGTCTCCT GCAAAAGCAA AGACTATCGA AAAATACTTA
GGACGTAACT ATAAAGTTGT AGCCTCAGTA GGTCATATCC GTGATTTAAA AAAGTCAAGT
ATGTCCATTG ATTTTGAGAA TAATTACGAA CCACAATATA TTAATATTCG TGGTAAAGGA
CCTCTCATTA ATGATTTAAA AAAAGAAGCT AAAAAGGCTA AAAAAGTTTA CCTCGCGAGT
GACCCGGACC GTGAAGGAGA AGCTATTTCC TGGCATTTAG CGCATATTTT AGATTTAGAC
AAAGAAGACA GAAACCGTGT TGTTTTCAAT GAAATCACAA AAGATGCTGT TAAAAATGCT
TTTGTGGAAC CTCGTCAGAT TAACATGGAT CTCGTTGATG CTCAGCAAGC ACGACGTGTT
TTAGATCGCA TTGTTGGTTA TTCTATCTCA CCTATTTTAT GGAAAAAAGT AAAAAAAGGC
CTATCAGCTG GACGTGTACA ATCAGTTGCT CTTAAACTAA TCATTGATCG TGAAAATGAG
ATTAAGGCTT TCCAACCGGA GGAGTATTGG ACTATTGACG GTTCCTTTAA AAAAGGAACA
CGTAAATTCA ATGCCACTTT CTACGGTTTA GACGGAAAGA AATTCAAATT ATCGAATAAT
GAAGACGTCA AAACAGTTCT AAAACGTATT AAAACTGATG AATTCTTAGT TGAAAAAGTT
GAAAAAAAAG AGCGTCGTCG TAATGCACCA TTACCGTATA CAACTTCTTC ATTGCAACAA
GATGCAGCTA ATAAAATCAA TTTTCGAACT CGTAAAACCA TGATGATTGC GCAACAGCTG
TACGAAGGAC TTAGCTTAGG CACAGCAGGT CATCAAGGTC TGATTACCTA TATGCGTACT
GATTCTACAC GTATTAGTCC GTTAGCACAA AATGAAGCAA CAGAATTTAT TACTAACCGT
TTTGGTGCAA ATTATTCTAA ACATGGGAAT AAAGTTAAAA ATGCTTCTGG AGCACAAGAC
GCTCACGAAG CTATTCGCCC ATCTAGTGTT AATCATACAC CCGAAAGTAT TGCTAAGTAT
TTAGACAAAG ATCAACTAAA ACTTTACACT CTTATCTGGA ACCGTTTTAT TGCAAGCCAA
ATGACAGCAG CAGTCTTTGA CACAATGAAA GTTAATTTAA CGCAAAATGG TGTTACTTTT
ATTGCTAATG GTAGCCAAGT CAAGTTTGAT GGTTACATGG CTGTTTATAA CGATACTGAC
AAAAATAAAA TGTTACCAGA TATGGAGGAA GGAGAAAGTG TTAAAAAGGT TAATACGAAT
CCTGAACAAC ACTTCACTCA ACCTCCTGCA AGGTTTTCAG AAGCAAGTCT CATTAAAACA
CTTGAAGAAA ACGGTGTAGG TCGTCCTTCA ACTTATGCCC CAACGCTTGA GACTATTCAA
AAACGTTATT ATGTTAAGCT TGCAGCTAAA CGCTTCGAAC CAACTGAACT TGGTGAAATT
GTTAATAGCC TTATTGTAGA ATTTTTCCCA GATATTGTTG ATGTTACCTT CACTGCCGAA
ATGGAAGGGA AACTAGACGA AGTTGAGATT GGTAAAGAGC AGTGGCAAAA GATTATCGAT
GAATTTTATA AACCATTTGA AAAAGAACTT GCAAAAGCAG AAACTGAAAT GGAGAAAATT
CAAATAAAGG ATGAACCTGC TGGATTTGAT TGCGAGCTAT GTGGATCACC AATGGTAATA
AAACTAGGAC GTTATGGAAA GTTTTATGCG TGTAGCAATT TCCCTGAATG TCATAACACA
AAAGCTATCA CTAAGGAAAT AGGTGTTATT TGTCCTATCT GTCAAAAAGG ACAAGTTATT
GAGCGAAAAA CAAAACGCAA TCGTATCTTT TATGGCTGTG ACCGCTACCC AGAATGTGAG
TTTACATCTT GGGACAAACC TATTGGACGA ACTTGCCCCA AATCAAATGA TTTCTTAGTG
GAGAAAAAAG TACGCGGTGG TGGTAAACAA GTTGTTTGCT CAAATGAAAA ATGCGACTAC
CAAGAAGAGA AAATTAAATA A
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| Protein sequence | MATTTKTSTK KTSKKKSATA KKNLVIVESP AKAKTIEKYL GRNYKVVASV GHIRDLKKSS
MSIDFENNYE PQYINIRGKG PLINDLKKEA KKAKKVYLAS DPDREGEAIS WHLAHILDLD
KEDRNRVVFN EITKDAVKNA FVEPRQINMD LVDAQQARRV LDRIVGYSIS PILWKKVKKG
LSAGRVQSVA LKLIIDRENE IKAFQPEEYW TIDGSFKKGT RKFNATFYGL DGKKFKLSNN
EDVKTVLKRI KTDEFLVEKV EKKERRRNAP LPYTTSSLQQ DAANKINFRT RKTMMIAQQL
YEGLSLGTAG HQGLITYMRT DSTRISPLAQ NEATEFITNR FGANYSKHGN KVKNASGAQD
AHEAIRPSSV NHTPESIAKY LDKDQLKLYT LIWNRFIASQ MTAAVFDTMK VNLTQNGVTF
IANGSQVKFD GYMAVYNDTD KNKMLPDMEE GESVKKVNTN PEQHFTQPPA RFSEASLIKT
LEENGVGRPS TYAPTLETIQ KRYYVKLAAK RFEPTELGEI VNSLIVEFFP DIVDVTFTAE
MEGKLDEVEI GKEQWQKIID EFYKPFEKEL AKAETEMEKI QIKDEPAGFD CELCGSPMVI
KLGRYGKFYA CSNFPECHNT KAITKEIGVI CPICQKGQVI ERKTKRNRIF YGCDRYPECE
FTSWDKPIGR TCPKSNDFLV EKKVRGGGKQ VVCSNEKCDY QEEKIK
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