| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SAG0985 |
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| Symbol | ciaR |
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| ID | 1013789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Streptococcus agalactiae 2603V/R |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004116 |
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| Strand | - |
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| Start bp | 993614 |
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| End bp | 994294 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 637316169 |
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| Product | DNA-binding response regulator CiaR |
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| Protein accession | NP_687996 |
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| Protein GI | 22537145 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.447626 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATAAAAA TTTTATTAAT TGAAGATGAC TTGAGTCTTT CCAATTCCGT TTTTGATTTC
CTTGATGACT TTGCCGATGT CATGCAAATT TTTGATGGAG AAGAGGGTCT TTACGAAGCC
GAAAGTGGAG TCTATGATCT GATTCTTCTA GATCTCATGT TACCTGAAAA AAACGGCTTC
CAAGTGTTGA AAGAGCTACG TGAAAAAGGT ATTACAACCC CTGTATTAAT AATGACCGCT
AAAGAAAGCA TTGATGATAA GGGACAAGGT TTCGACTTAG GTGCTGATGA TTATCTAACA
AAACCTTTTT ACCTAGAAGA ACTAAAAATG CGAATTCAGG CTCTTTTAAA GCGTTCTGGA
AAATTTAATG ATAACAGCCT AATTTATGGT GATATTCGCG TAGACATGTC TACTAACTCA
ACCTTTGTTA ATCAAACAGA AGTTGAGCTC TTAGGTAAAG AGTTTGATCT TTTAGTCTAT
TTCCTTCAAA ATCAAAATGT TATCTTACCG AAATCTCAAA TCTTTGATCG TATTTGGGGA
TTTGATAGTG ATACAACGAT TTCAGTTGTA GAAGTCTATG TCTCTAAGGT TCGGAAAAAA
TTAAAAGGAA CACTTTTTTC AGAAAACCTT CAAACTTTGC GTAGTGTAGG ATATATTTTA
AAGCATGTCG AAACCGATTA A
|
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| Protein sequence | MIKILLIEDD LSLSNSVFDF LDDFADVMQI FDGEEGLYEA ESGVYDLILL DLMLPEKNGF
QVLKELREKG ITTPVLIMTA KESIDDKGQG FDLGADDYLT KPFYLEELKM RIQALLKRSG
KFNDNSLIYG DIRVDMSTNS TFVNQTEVEL LGKEFDLLVY FLQNQNVILP KSQIFDRIWG
FDSDTTISVV EVYVSKVRKK LKGTLFSENL QTLRSVGYIL KHVETD
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