Gene SAG0978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSAG0978 
SymbolxerS 
ID1013782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus agalactiae 2603V/R 
KingdomBacteria 
Replicon accessionNC_004116 
Strand
Start bp985580 
End bp986650 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content35% 
IMG OID637316162 
Productsite-specific tyrosine recombinase XerS 
Protein accessionNP_687989 
Protein GI22537138 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGTG AATTACTACT CGAAAAAATC GATGAACTAA AAGAAATTAT GCCTTGGTAT 
GTTCTAGAAT ATTATCAATC AAAGCTTTCT GTTCCTTATA GTTTCACAAC ACTCTACGAA
TATTTAAAAG AATATAGACG TTTTCTTGAA TGGTTATTGG ATTCTGGTGT TGCTAATTGT
CATCACATTG CAGAAATTGA GCTTTCAGTT TTAGAAAACC TTACTAAAAA AGATATGGAA
GCTTTTATAC TATATTTACG AGAACGCCCT TTATTAAATG CTAACACAAG GCAAAATGGG
GTGTCTCAAA CCACCATTAA CAGAACTCTA TCTGCCTTAT CTAGTCTTTT CAAATACCTT
ACTGAAGAGG TTGAGAATGC TGACGGGGAG CCTTACTTTT ATCGCAATGT CATGAAAAAA
GTCTCAACCA AAAAGAAAAA GGAAACTTTA GCTTCTCGGG CAGAAAATAT TAAACAAAAG
TTATTTTTGG GCAATGAAAC GATAGAATTC TTAGAGTATA TAGATTGTGA ATATCAAAAC
AAACTTTCCA AACGTGCTTT AGCTTTTTTC AACAAAAATA AAGAGAGAGA TTTAGCTATT
ATTGCTTTGC TACTAGCTTC AGGAGTGCGT CTATCTGAGG CAGTAAACTT AGATTTAAAG
GATATTAACC TTAATGTAAT GGTTATTGAT GTCACACGAA AAGGGGGGAA AAGGGACTCT
GTCAATGTCG CTAGCTTTGC GAAGCCCTAC CTTGCTAATT ATTTAGACAT CCGTAAAAAT
AGATACAAAG CAGAAAATCA GGACATTGCT CTATTTTTAT CAGAATACCG TGGGGTGCCA
AATCGTATTG ATGCTTCAAG TGTAGAGAAA ATGGTTGCTA AGTATTCCCA GGATTTTAAG
GTTCGTGTAA CACCTCATAA ACTAAGGCAT ACTCTTGCTA CTAGGCTATA TGATGCTACA
AAATCTCAAG TATTAGTTAG CCACCAACTA GGTCATGCTT CCACTCAAGT TACTGACCTA
TATACCCATA TTGTTAACGA TGAACAAAAG AACGCTTTAG ATAAACTATA G
 
Protein sequence
MKRELLLEKI DELKEIMPWY VLEYYQSKLS VPYSFTTLYE YLKEYRRFLE WLLDSGVANC 
HHIAEIELSV LENLTKKDME AFILYLRERP LLNANTRQNG VSQTTINRTL SALSSLFKYL
TEEVENADGE PYFYRNVMKK VSTKKKKETL ASRAENIKQK LFLGNETIEF LEYIDCEYQN
KLSKRALAFF NKNKERDLAI IALLLASGVR LSEAVNLDLK DINLNVMVID VTRKGGKRDS
VNVASFAKPY LANYLDIRKN RYKAENQDIA LFLSEYRGVP NRIDASSVEK MVAKYSQDFK
VRVTPHKLRH TLATRLYDAT KSQVLVSHQL GHASTQVTDL YTHIVNDEQK NALDKL