Gene SAG0956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSAG0956 
Symbol 
ID1013760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus agalactiae 2603V/R 
KingdomBacteria 
Replicon accessionNC_004116 
Strand
Start bp961700 
End bp962761 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content38% 
IMG OID637316141 
Productsugar ABC transporter, permease protein, putative 
Protein accessionNP_687968 
Protein GI22537117 
COG category[R] General function prediction only 
COG ID[COG4603] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.281596 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAAGA AGGCGCAAAA AATTGCAGTT CCTCTGATTT CAGTTGTACT AGGAATCATT 
CTAGGAGCTA TTATTATGCT GATATTTGGT TATGATCCAC TTTGGGGTTA TGAGGGATTG
TTCCAAACAG CATTCGGTAG TATAAAAAAT ATTGGTGAAA TTTTCCGTGC AATGGGACCA
TTAATTTTAA TTGCTCTAGG TTTCTCAGTT GCCAGTCGTG CAGGTTTCTT TAATATTGGA
CTTCCAGGGC AAGCCTTATC AGGATGGATT GCCGCAGGTT GGTTCGCTCT TTCACACCCA
GATATGCCAC GTCCAGCAAT GATTCTTTGT ACTATTATTA TTGGTATCGT TGCTGGGGGA
ATCACTGGAG CTATTCCAGG TATTCTCAGA GCATACCTTG GAACAAGTGA AGTTATTGTA
ACTATTATGA TGAACTATAT TGTTCTTTAT TCAGGAAATG CTATTGTACA ACGTGTTTTC
CCAAAAAGCA TTATGCGTAC AAGTGACTCG AGTGTATATG TTTCTGCCAA TGCATCATAC
CAGACAGATT GGTTATCTAG TTTAACGAAT AATTCACGTA TCAATATTGG TATCTTCATT
GCTATTATTG CAGTTGTGTT AGTTTGGTTC CTATTAAATA AAACAACGCT TGGATTTGAA
ATTCGTTCAG TTGGTTTAAA TCCAAATGCT AGTGAGTACG CTGGTATGTC TGCAAAGCGT
ACAATTATTC TATCAATGAT TATTTCTGGA GCTTTTGCAG GACTTGGTGG TGTTGTTGAA
GGACTAGGTA CATTTGAGAA TGTATTTGTA CAGCCATCCT CGTTAGCTAT TGGCTTTGAC
GGTATGGCAG TAAGTCTACT CGCAGCGAAT AGTCCAATAG GTATTTTATT TGCAGCATTT
CTATTTGGTG TTCTAAGTGT TGGTGCGCCT GGTATGAACA TTGCAGGTAT TCCACCTGAG
TTAATTAAAG TTGTAACAGC TTCAATCATC TTCTTCGTAG GTGTCCATTA CATTATTGAG
TATGTTATTA AACCTAAAAA ACAAATGAAA GGTGGTAAGT AA
 
Protein sequence
MSKKAQKIAV PLISVVLGII LGAIIMLIFG YDPLWGYEGL FQTAFGSIKN IGEIFRAMGP 
LILIALGFSV ASRAGFFNIG LPGQALSGWI AAGWFALSHP DMPRPAMILC TIIIGIVAGG
ITGAIPGILR AYLGTSEVIV TIMMNYIVLY SGNAIVQRVF PKSIMRTSDS SVYVSANASY
QTDWLSSLTN NSRINIGIFI AIIAVVLVWF LLNKTTLGFE IRSVGLNPNA SEYAGMSAKR
TIILSMIISG AFAGLGGVVE GLGTFENVFV QPSSLAIGFD GMAVSLLAAN SPIGILFAAF
LFGVLSVGAP GMNIAGIPPE LIKVVTASII FFVGVHYIIE YVIKPKKQMK GGK