Gene SAG0923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSAG0923 
SymboltetM 
ID1013727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus agalactiae 2603V/R 
KingdomBacteria 
Replicon accessionNC_004116 
Strand
Start bp927455 
End bp929374 
Gene Length1920 bp 
Protein Length639 aa 
Translation table11 
GC content36% 
IMG OID637316110 
Producttetracycline resistance protein 
Protein accessionNP_687937 
Protein GI22537086 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0480] Translation elongation factors (GTPases) 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTA TTAATATTGG AGTTTTAGCT CATGTTGATG CAGGAAAAAC TACCTTAACA 
GAAAGCTTAT TATATAACAG TGGAGCGATT ACAGAATTAG GAAGCGTGGA CAAAGGTACA
ACGAGGACGG ATAATACGCT TTTAGAACGT CAGAGAGGAA TTACAATTCA GACAGGAATA
ACCTCTTTTC AGTGGGAAAA TACGAAGGTG AACATCATAG ACACGCCAGG ACATATGGAT
TTCTTAGCAG AAGTATATCG TTCATTATCA GTTTTAGATG GGGCAATTCT ACTGATTTCT
GCAAAAGATG GCGTACAAGC ACAAACTCGT ATATTATTTC ATGCACTTAG GAAAATGGGG
ATTCCCACAA TCTTTTTTAT CAATAAGATT GACCAAAATG GAATTGATTT ATCAACGGTT
TATCAGGATA TTAAAGAGAA ACTTTCTGCC GAAATTGTAA TCAAACAGAA GGTAGAACTG
TATCCTAATA TGTGTGTGAC GAACTTTACC GAATCTGAAC AATGGGATAC GGTAATAGAG
GGAAACGATG ACCTTTTAGA GAAATATATG TCCGGTAAAT CATTAGAAGC ATTGGAACTC
GAACAAGAGG AAAGCATAAG ATTTCATAAT TGTTCCCTGT TCCCTGTTTA TCACGGAAGT
GCAAAAAACA ATATAGGGAT TGATAACCTT ATAGAAGTGA TTACGAATAA ATTTTATTCA
TCAACACATC GAGGTCCGTC TGAACTTTGC GGAAATGTTT TCAAAATTGA ATATACAAAA
AAAAGACAAC GTCTTGCATA TATACGCCTT TATAGTGGAG TACTACATTT ACGAGATTCG
GTTAGAGTAT CAGAAAAAGA AAAAATAAAA GTTACAGAAA TGTATACTTC AATAAATGGT
GAATTATGTA AGATTGATAG AGCTTATTCT GGAGAAATTG TTATTTTGCA AAATGAGTTT
TTGAAGTTAA ATAGTGTTCT TGGAGATACA AAACTATTGC CACAGAGAAA AAAGATTGAA
AATCCGCACC CTCTACTACA AACAACTGTT GAACCGAGTA AACCTGAACA GAGAGAAATG
TTGCTTGATG CCCTTTTGGA AATCTCAGAT AGTGATCCGC TTCTACGATA TTACGTGGAT
TCTACGACAC ATGAAATTAT ACTTTCTTTC TTAGGGAAAG TACAAATGGA AGTGATTAGT
GCACTGTTGC AAGAAAAGTA TCATGTGGAG ATAGAACTAA AAGAGCCTAC AGTCATTTAT
ATGGAGAGAC CGTTAAAAAA TGCAGAATAT ACCATTCACA TCGAAGTGCC GCCAAATCCT
TTCTGGGCTT CCATTGGTTT ATCTGTATCA CCGCTTCCGT TGGGAAGTGG AATGCAGTAT
GAGAGCTCGG TTTCTCTTGG ATACTTAAAT CAATCATTTC AAAATGCAGT TATGGAAGGG
ATACGCTATG GTTGCGAACA AGGATTATAT GGTTGGAATG TGACGGATTG TAAAATCTGT
TTTAAGTATG GCTTATACTA TAGCCCTGTT AGTACCCCAG CAGATTTTCG GATGCTTGCT
CCTATTGTAT TGGAACAAGT CTTAAAAAAA GCTGGAACAG AATTGTTAGA GCCATATCTT
AGTTTTAAAA TTTATGCGCC ACAGGAATAT CTTTCACGAG CATACAACGA TGCTCCTAAA
TATTGTGCGA ACATCGTAGA CACTCAATTG AAAAATAATG AGGTCATTCT TAGTGGAGAA
ATCCCTGCTC GGTGTATTCA AGAATATCGT AGTGATTTAA CTTTCTTTAC AAATGGACGT
AGTGTTTGTT TAACAGAGTT AAAAGGGTAC CATGTTACTA CCGGTGAACC TGTTTGCCAG
CCCCGTCGTC CAAATAGTCG GATAGATAAA GTACGATATA TGTTCAATAA AATAACTTAG
 
Protein sequence
MKIINIGVLA HVDAGKTTLT ESLLYNSGAI TELGSVDKGT TRTDNTLLER QRGITIQTGI 
TSFQWENTKV NIIDTPGHMD FLAEVYRSLS VLDGAILLIS AKDGVQAQTR ILFHALRKMG
IPTIFFINKI DQNGIDLSTV YQDIKEKLSA EIVIKQKVEL YPNMCVTNFT ESEQWDTVIE
GNDDLLEKYM SGKSLEALEL EQEESIRFHN CSLFPVYHGS AKNNIGIDNL IEVITNKFYS
STHRGPSELC GNVFKIEYTK KRQRLAYIRL YSGVLHLRDS VRVSEKEKIK VTEMYTSING
ELCKIDRAYS GEIVILQNEF LKLNSVLGDT KLLPQRKKIE NPHPLLQTTV EPSKPEQREM
LLDALLEISD SDPLLRYYVD STTHEIILSF LGKVQMEVIS ALLQEKYHVE IELKEPTVIY
MERPLKNAEY TIHIEVPPNP FWASIGLSVS PLPLGSGMQY ESSVSLGYLN QSFQNAVMEG
IRYGCEQGLY GWNVTDCKIC FKYGLYYSPV STPADFRMLA PIVLEQVLKK AGTELLEPYL
SFKIYAPQEY LSRAYNDAPK YCANIVDTQL KNNEVILSGE IPARCIQEYR SDLTFFTNGR
SVCLTELKGY HVTTGEPVCQ PRRPNSRIDK VRYMFNKIT