Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SAG0923 |
Symbol | tetM |
ID | 1013727 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus agalactiae 2603V/R |
Kingdom | Bacteria |
Replicon accession | NC_004116 |
Strand | - |
Start bp | 927455 |
End bp | 929374 |
Gene Length | 1920 bp |
Protein Length | 639 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637316110 |
Product | tetracycline resistance protein |
Protein accession | NP_687937 |
Protein GI | 22537086 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0480] Translation elongation factors (GTPases) |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00484] translation elongation factor EF-G |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAATTA TTAATATTGG AGTTTTAGCT CATGTTGATG CAGGAAAAAC TACCTTAACA GAAAGCTTAT TATATAACAG TGGAGCGATT ACAGAATTAG GAAGCGTGGA CAAAGGTACA ACGAGGACGG ATAATACGCT TTTAGAACGT CAGAGAGGAA TTACAATTCA GACAGGAATA ACCTCTTTTC AGTGGGAAAA TACGAAGGTG AACATCATAG ACACGCCAGG ACATATGGAT TTCTTAGCAG AAGTATATCG TTCATTATCA GTTTTAGATG GGGCAATTCT ACTGATTTCT GCAAAAGATG GCGTACAAGC ACAAACTCGT ATATTATTTC ATGCACTTAG GAAAATGGGG ATTCCCACAA TCTTTTTTAT CAATAAGATT GACCAAAATG GAATTGATTT ATCAACGGTT TATCAGGATA TTAAAGAGAA ACTTTCTGCC GAAATTGTAA TCAAACAGAA GGTAGAACTG TATCCTAATA TGTGTGTGAC GAACTTTACC GAATCTGAAC AATGGGATAC GGTAATAGAG GGAAACGATG ACCTTTTAGA GAAATATATG TCCGGTAAAT CATTAGAAGC ATTGGAACTC GAACAAGAGG AAAGCATAAG ATTTCATAAT TGTTCCCTGT TCCCTGTTTA TCACGGAAGT GCAAAAAACA ATATAGGGAT TGATAACCTT ATAGAAGTGA TTACGAATAA ATTTTATTCA TCAACACATC GAGGTCCGTC TGAACTTTGC GGAAATGTTT TCAAAATTGA ATATACAAAA AAAAGACAAC GTCTTGCATA TATACGCCTT TATAGTGGAG TACTACATTT ACGAGATTCG GTTAGAGTAT CAGAAAAAGA AAAAATAAAA GTTACAGAAA TGTATACTTC AATAAATGGT GAATTATGTA AGATTGATAG AGCTTATTCT GGAGAAATTG TTATTTTGCA AAATGAGTTT TTGAAGTTAA ATAGTGTTCT TGGAGATACA AAACTATTGC CACAGAGAAA AAAGATTGAA AATCCGCACC CTCTACTACA AACAACTGTT GAACCGAGTA AACCTGAACA GAGAGAAATG TTGCTTGATG CCCTTTTGGA AATCTCAGAT AGTGATCCGC TTCTACGATA TTACGTGGAT TCTACGACAC ATGAAATTAT ACTTTCTTTC TTAGGGAAAG TACAAATGGA AGTGATTAGT GCACTGTTGC AAGAAAAGTA TCATGTGGAG ATAGAACTAA AAGAGCCTAC AGTCATTTAT ATGGAGAGAC CGTTAAAAAA TGCAGAATAT ACCATTCACA TCGAAGTGCC GCCAAATCCT TTCTGGGCTT CCATTGGTTT ATCTGTATCA CCGCTTCCGT TGGGAAGTGG AATGCAGTAT GAGAGCTCGG TTTCTCTTGG ATACTTAAAT CAATCATTTC AAAATGCAGT TATGGAAGGG ATACGCTATG GTTGCGAACA AGGATTATAT GGTTGGAATG TGACGGATTG TAAAATCTGT TTTAAGTATG GCTTATACTA TAGCCCTGTT AGTACCCCAG CAGATTTTCG GATGCTTGCT CCTATTGTAT TGGAACAAGT CTTAAAAAAA GCTGGAACAG AATTGTTAGA GCCATATCTT AGTTTTAAAA TTTATGCGCC ACAGGAATAT CTTTCACGAG CATACAACGA TGCTCCTAAA TATTGTGCGA ACATCGTAGA CACTCAATTG AAAAATAATG AGGTCATTCT TAGTGGAGAA ATCCCTGCTC GGTGTATTCA AGAATATCGT AGTGATTTAA CTTTCTTTAC AAATGGACGT AGTGTTTGTT TAACAGAGTT AAAAGGGTAC CATGTTACTA CCGGTGAACC TGTTTGCCAG CCCCGTCGTC CAAATAGTCG GATAGATAAA GTACGATATA TGTTCAATAA AATAACTTAG
|
Protein sequence | MKIINIGVLA HVDAGKTTLT ESLLYNSGAI TELGSVDKGT TRTDNTLLER QRGITIQTGI TSFQWENTKV NIIDTPGHMD FLAEVYRSLS VLDGAILLIS AKDGVQAQTR ILFHALRKMG IPTIFFINKI DQNGIDLSTV YQDIKEKLSA EIVIKQKVEL YPNMCVTNFT ESEQWDTVIE GNDDLLEKYM SGKSLEALEL EQEESIRFHN CSLFPVYHGS AKNNIGIDNL IEVITNKFYS STHRGPSELC GNVFKIEYTK KRQRLAYIRL YSGVLHLRDS VRVSEKEKIK VTEMYTSING ELCKIDRAYS GEIVILQNEF LKLNSVLGDT KLLPQRKKIE NPHPLLQTTV EPSKPEQREM LLDALLEISD SDPLLRYYVD STTHEIILSF LGKVQMEVIS ALLQEKYHVE IELKEPTVIY MERPLKNAEY TIHIEVPPNP FWASIGLSVS PLPLGSGMQY ESSVSLGYLN QSFQNAVMEG IRYGCEQGLY GWNVTDCKIC FKYGLYYSPV STPADFRMLA PIVLEQVLKK AGTELLEPYL SFKIYAPQEY LSRAYNDAPK YCANIVDTQL KNNEVILSGE IPARCIQEYR SDLTFFTNGR SVCLTELKGY HVTTGEPVCQ PRRPNSRIDK VRYMFNKIT
|
| |