Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SAG0853 |
Symbol | glgB |
ID | 1013657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus agalactiae 2603V/R |
Kingdom | Bacteria |
Replicon accession | NC_004116 |
Strand | + |
Start bp | 853443 |
End bp | 855311 |
Gene Length | 1869 bp |
Protein Length | 622 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637316041 |
Product | glycogen branching enzyme |
Protein accession | NP_687868 |
Protein GI | 22537017 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00164465 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCAATA AAGATGAGTT ATATACTTTT GGAATAGGTG AAAATTTTCA TCTCCAGAAT TATTTAGGCG TACATAGCGA AAATGGAAGC TTTTGTTTCA GAGTTTGGGC TCCTAATGCT GAAAATGTTC AAGTTATTGG AGATTTTACA GATTGGCGAA ATCGACCTCT CCAAATGAAC AAAAATCAAG CAGGAGTTTG GGAAGCTAAC AGTTTGGATG CGCGCGAAGG TGATTTATAT AAATATTTGG TTACTCGTAA AGGTGGTCAA GTAGTTGAGA AAATCGATCC TATGGCAGTT TATATGGAAA GACGTCCTGG AACTGCAAGT GTTATTAAAG TTCTTAGAAA TAAAAAGTGG GAAGATGGTC TTTGGATGGG AAGGCGCAAA CGTCTGGGTT TTCAGAAGCG TCCAATTAAT ATTTACGAAG TTCATGCTGG TTCATGGAAA AAAGATGATT TTGGACATCC TATGACTTTT TCTCAGTTAA AAGATTACTT AATCCCCTAC CTTGTTGAGA TGAATTATAC TCATGTTGAA TTTATGCCCT TAATGGCACA TCCGCTTGAT ATGAGTTGGG GATATCAATT AATGGGGTAT TTTGCTTTTG AACATACCTA TGGTACTCCA GAAGAATTTC AAGACTTTGT AGAAGCATGT CATAAAAATA ATATAGGAGT TCTTGTAGAT TGGGTTCCAG GACACTTTAT TCAGAATGAC GATGCTTTAG CCTATTTCGA TGGAACTGCT ACTTATGAGT ATCAAAATCA TGATCGTGCG CATAACTATC GATGGGGAGC TCTGAACTTT GATTTAGGAA AAAATCAAGT ACAATCCTTT TTGATTTCGA GTGCCTTGTT CTGGATTGAA CATTATCATA TTGATGGTAT TCGTGTTGAT GCGGTTAGTA ATATGTTATA TCTCGATTAT GATGAAGGAC CATGGGAAGC TAACCAATTT GGGGATAATC GTAATTTGGA AGGATATCAC TTTTTAAGGA AACTTAACAA AGTAATTAAA GAGCGTCATC CTAATGTTAT GATGATTGCT GAAGAGTCAA CAGCTTCTAC CCCAATAACT AAAGACTTAG AGTCTGGAGG ATTGGGTTTT GACTTTAAAT GGAATATGGG CTGGATGAAT GATATCCTGC GTTTTTATGA AGAAGATCCT CTCTATAGGC AATATGATTT TAATTTAGTG ACTTTTAGTT TTATGTATAT ATTCAATGAG AACTTTGTAC TAGCTTTTTC ACATGATGAA GTAGTACATG GTAAAAAGAG TATGATGCAT AAAATGTGGG GTGACCGTTA TAATCAATTT GCTGGTTTAC GTAATTTATA TGCATATCAA ATGTGTCATC CTGGGAAAAA ACTTCTCTTT ATGGGAAGTG AGTTTGGTCA ATTTTTAGAA TGGAAATATA ATGATCAACT AGAATGGGAA AACTTAAATG ATGATATGAA CCAAAAGATG CAACGCTATA CTAAACAATT GAATCAATTT TATAAAGATC ATAAGTGCCT ATGGCGTATT GATGATTCCT TTGACGGGCT AGAAATTATT GATGCGGATA ATAAATCTGA AACTGTTTTA TCTTTTATAC GAAAAGATGA TAAAGGCGAT TTGTTACTTT GTGTCTTTAA TATGACTCCT GTAGAACGCC CTAACTTTAC TATTGGTGTT CCGCAAGCGG GTATTTATGA AGAAGTTTTA AATACTGAAA TGGAAGAGTT TGGAGGTGTT TGGAAAAACC ACAATCCTGT AACGAAAACA CAAGTGGCTA CATGGAAAGA TTATGATCAT ACTTTAAGTT TTACATTACC AGCCCTTGGG GCAAGTGTTT GGAGAATAAA ACGTCGGCTT CGTAAATAA
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Protein sequence | MSNKDELYTF GIGENFHLQN YLGVHSENGS FCFRVWAPNA ENVQVIGDFT DWRNRPLQMN KNQAGVWEAN SLDAREGDLY KYLVTRKGGQ VVEKIDPMAV YMERRPGTAS VIKVLRNKKW EDGLWMGRRK RLGFQKRPIN IYEVHAGSWK KDDFGHPMTF SQLKDYLIPY LVEMNYTHVE FMPLMAHPLD MSWGYQLMGY FAFEHTYGTP EEFQDFVEAC HKNNIGVLVD WVPGHFIQND DALAYFDGTA TYEYQNHDRA HNYRWGALNF DLGKNQVQSF LISSALFWIE HYHIDGIRVD AVSNMLYLDY DEGPWEANQF GDNRNLEGYH FLRKLNKVIK ERHPNVMMIA EESTASTPIT KDLESGGLGF DFKWNMGWMN DILRFYEEDP LYRQYDFNLV TFSFMYIFNE NFVLAFSHDE VVHGKKSMMH KMWGDRYNQF AGLRNLYAYQ MCHPGKKLLF MGSEFGQFLE WKYNDQLEWE NLNDDMNQKM QRYTKQLNQF YKDHKCLWRI DDSFDGLEII DADNKSETVL SFIRKDDKGD LLLCVFNMTP VERPNFTIGV PQAGIYEEVL NTEMEEFGGV WKNHNPVTKT QVATWKDYDH TLSFTLPALG ASVWRIKRRL RK
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