Gene SAG0850 details

Gene Information

• Locus tag: SAG0850
• Symbol: ligA
• ID: 1013654
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Streptococcus agalactiae 2603V/R
• Kingdom: Bacteria
• Replicon accession: NC_004116
• Strand: +
• Start bp: 847944
• End bp: 849902
• Gene Length: 1959 bp
• Protein Length: 652 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 637316038
• Product: NAD-dependent DNA ligase LigA
• Protein accession: NP_687865
• Protein GI: 22537014
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II)
• TIGRFAM ID: [TIGR00575] DNA ligase, NAD-dependent

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAAATC GTATGAATGA ATTAGTATCT TTGTTGAATC AGTACGCAAA AGAGTATTAT 
ACACAAGATA ATCCCACAGT TTCTGACAGT CAATATGACC AGTTATATCG AGAGTTAGTA 
GAATTAGAAA AGCAACATCC AGAAAACATT TTGCCAAATA GTCCCACACA TCGAGTGGGT 
GGTTTAGTTT TAGAAGGCTT TGAAAAATAC CAACATGAAT ATCCTTTGTA TTCATTGCAG 
GATGCTTTCT CAAAAGAAGA ATTGATAGCC TTTGATAAAC GTGTTAAAGC AGAGTTTCCA 
ACTGCTGCTT ATATGGCAGA GCTGAAAATT GATGGTCTAT CTGTCTCGTT GACTTATGTA 
AATGGTGTTT TACAGGTTGG GGCAACACGT GGTGATGGCA ATATTGGAGA AAATATTACT 
GAAAATTTAA AGCGTGTTCA TGATATTCCT CTACATTTAG ACCAAAGTTT AGATATTACT 
GTTCGCGGAG AGTGCTACCT TCCCAAAGAA TCTTTTGAAG CTATTAACAT AGAAAAACGA 
GCAAATGGTG AGCAGGAATT TGCTAATCCT AGGAATGCAG CAGCAGGAAC CTTGCGCCAA 
TTAAACACAG GAATTGTTGC GAAACGTAAA TTAGCAACTT TTCTTTATCA AGAAGCTAGC 
CCTACGCAAA AAGAAACACA AGATGATGTT TTAAAAGAGC TAGAAAGCTA TGGCTTTTCA 
GTCAATCATC ATCGTTTAAT TAGCTCGTCT ATGGAGAAAA TTTGGGATTT TATCCAAACT 
ATAGAAAAAG ATAGAGTTTC CCTCCCTTAT GATATCGATG GTATTGTTAT TAAGGTTAAT 
AGCATAGCAA TGCAAGAAGA GCTGGGCTTC ACTGTAAAGG CACCTCGTTG GGCGATTGCA 
TATAAATTTC CTGCTGAAGA AAAGGAAGCA GAAATATTAT CTGTTGATTG GACAGTTGGG 
CGAACAGGAG TCGTAACACC AACAGCTAAC CTAACTCCAG TTCAACTAGC AGGGACAACC 
GTTAGTAGGG CCACTCTGCA TAATGTAGAT TATATTGCCG AAAAAGATAT CCGTATTGGA 
GATACTGTTG TTGTATACAA AGCAGGGGAT ATCATCCCTG CAGTCTTAAA TGTCGTTATG 
AGTAAGCGAA ACCAGCAAGA AGTCATGCTT ATTCCTAAAC TATGTCCTTC TTGTGGTAGT 
GAATTAGTTC ATTTTGAAGG TGAGGTGGCT TTACGTTGTA TTAATCCGCT GTGCCCCAAC 
CAAATCAAAG AACGTTTAGC TCATTTTGCT AGCCGAGATG CTATGAATAT TACAGGTTTT 
GGTCCATCCT TAGTCGAAAA ATTATTTGAT GCTCATTTAA TAGCAGATGT TGCAGATATT 
TATCGTTTAA GTATAGAGAA TTTATTAACT TTAGATGGTA TTAAAGAGAA ATCTGCAACT 
AAGATTTATC ATGCAATCCA ATCTTCAAAA GAAAATTCTG CTGAAAAACT TCTTTTTGGC 
CTAGGTATTC GTCATGTGGG AAGCAAGGCG AGCCGCCTTT TATTGGAGGA ATTTGGTAAT 
TTGAGGCAAC TAAGTCAAGC AAGTCAAGAA AGTATTGCCT CAATTGATGG ACTAGGAGGG 
GTTATTGCCA AATCACTTCA TACCTTCTTT GAAAAAGAAG AGGTAGATAA ACTACTAGAG 
GAATTAACTT CCTATAACGT TAATTTTAAT TATCTAGGAA AACGAGTTAG TACAGATGCA 
CAACTTTCAG GTTTAACAGT CGTTTTAACC GGTAAGCTTG AAAAAATGAC TCGTAATGAA 
GCAAAAGAGA AATTACAAAA CCTTGGTGCT AAGGTGACAG GTAGCGTTTC TAAAAAGACT 
GATTTAATTG TTGCAGGAAG CGATGCAGGA AGTAAACTAA CCAAGGCTCA AGATTTAGGG 
ATTACAATAC AAGATGAAGA CTGGTTACTC AACCTTTAA 

 

Protein sequence

MENRMNELVS LLNQYAKEYY TQDNPTVSDS QYDQLYRELV ELEKQHPENI LPNSPTHRVG 
GLVLEGFEKY QHEYPLYSLQ DAFSKEELIA FDKRVKAEFP TAAYMAELKI DGLSVSLTYV 
NGVLQVGATR GDGNIGENIT ENLKRVHDIP LHLDQSLDIT VRGECYLPKE SFEAINIEKR 
ANGEQEFANP RNAAAGTLRQ LNTGIVAKRK LATFLYQEAS PTQKETQDDV LKELESYGFS 
VNHHRLISSS MEKIWDFIQT IEKDRVSLPY DIDGIVIKVN SIAMQEELGF TVKAPRWAIA 
YKFPAEEKEA EILSVDWTVG RTGVVTPTAN LTPVQLAGTT VSRATLHNVD YIAEKDIRIG 
DTVVVYKAGD IIPAVLNVVM SKRNQQEVML IPKLCPSCGS ELVHFEGEVA LRCINPLCPN 
QIKERLAHFA SRDAMNITGF GPSLVEKLFD AHLIADVADI YRLSIENLLT LDGIKEKSAT 
KIYHAIQSSK ENSAEKLLFG LGIRHVGSKA SRLLLEEFGN LRQLSQASQE SIASIDGLGG 
VIAKSLHTFF EKEEVDKLLE ELTSYNVNFN YLGKRVSTDA QLSGLTVVLT GKLEKMTRNE 
AKEKLQNLGA KVTGSVSKKT DLIVAGSDAG SKLTKAQDLG ITIQDEDWLL NL