Gene SAG0623 details

Gene Information

• Locus tag: SAG0623
• Symbol: gyrB
• ID: 1013427
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Streptococcus agalactiae 2603V/R
• Kingdom: Bacteria
• Replicon accession: NC_004116
• Strand: +
• Start bp: 611651
• End bp: 613603
• Gene Length: 1953 bp
• Protein Length: 650 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 637315820
• Product: DNA gyrase subunit B
• Protein accession: NP_687647
• Protein GI: 22536796
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
• TIGRFAM ID: [TIGR01059] DNA gyrase, B subunit

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.00302751
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAGAAG AAACAAAGAA TATGGAACAA CGTGCTCAAG AATATGACGC AAGTCAGATT 
CAAGTATTAG AAGGTTTAGA AGCTGTTCGC ATGCGTCCAG GCATGTATAT CGGTTCGACT 
TCGAAAGAAG GGCTTCATCA CCTTGTATGG GAAATTGTTG ATAACTCAAT TGATGAAGCC 
TTAGCTGGAT TTGCAGGACA TATTAAAGTT TACATTGAAC CAGATAACTC TATTACAGTT 
GTTGATGATG GTCGCGGTAT TCCGGTAGAT ATCCAAGAAA AAACTGGAAG ACCAGCTGTA 
GAGACAGTTT TTACAGTTCT CCATGCCGGT GGTAAATTTG GTGGTGGCGG ATACAAGGTT 
TCTGGTGGCT TACATGGTGT AGGGTCATCT GTTGTTAATG CATTGTCAAC ACAATTAGAT 
GTCAAGGTTT ATAAAAATGG CAAGGTTCAT TATCAAGAAT ACCAACGCGG TGTTGTTGTT 
AATGATCTTG AAATTATCGG TGATACTGAC TTATCAGGAA CAACAGTTCA CTTTACGCCT 
GACCCAGAAA TTTTCACTGA AACCACTGTA TTTGATTTTG ATAAATTAGC CAAACGTATT 
CAGGAATTAG CTTTTTTAAA TCGTGGACTA AGAATCTCCA TTTCAGACAA GCGAGAAGGT 
CAAGAAGTTG AAAAAGAATA TCACTATGAA GGTGGTATAG GTTCATACGT TGAGTTTATC 
AATGAGAACA AAGAAGTGAT TTTTGAAAAT CCTATTTATA CTGACGGTGA ATTAGATGGT 
ATTTCAGTTG AAGTAGCAAT GCAGTATACT ACTGGATATC AAGAGACTGT TATGAGTTTT 
GCAAATAACA TCCACACTCA TGAAGGAGGA ACGCACGAAC AAGGATTTCG TACTGCCTTG 
ACACGTGTGA TTAATGATTA CGCTAAAAAG AATAAGATTC TCAAAGAAAA TGAAGATAAT 
TTAACTGGAG AAGATGTTCG TGAAGGTTTA ACAGCAGTTA TATCTGTTAA ACATCCAAAT 
CCACAATTTG AAGGACAAAC TAAAACAAAA CTTGGAAATT CTGAAGTTGT TAAAATTACA 
AATCGTCTCT TTAGCGAAGC TTTCAATCGA TTCCTATTAG AAAATCCACA AGTAGCTAAG 
AAGATTGTTG AAAAAGGAAT TTTGGCATCT AAAGCCCGTA TTGCAGCAAA ACGGGCGCGT 
GAAGTAACAC GTAAAAAGTC AGGCTTAGAG ATTTCAAACT TACCTGGGAA ACTGGCTGAT 
TGCTCATCTA ATAATGCTGA GATGAATGAA CTTTTTATAG TGGAGGGAGA TTCTGCGGGA 
GGGTCTGCAA AATCAGGACG TAATCGTGAG TTTCAAGCAA TTTTACCGAT TAGGGGTAAG 
ATTCTAAACG TTGAAAAAGC TACAATGGAT AAAATTTTAG CAAACGAAGA AATCCGAAGT 
CTCTTCACAG CTATGGGAAC TGGATTTGGT GCAGATTTTG ATGTATCAAA AGTCAGATAT 
CAAAAATTAG TCATTATGAC TGATGCCGAT GTTGATGGAG CTCACATCAG AACTTTACTT 
TTAACTCTGA TTTATCGTTT TATGCGACCT GTTTTGGAAG CAGGATATGT TTATATCGCT 
CAACCACCAA TCTATGGTGT CAAAGTAGGA AGTGAGATTA AAGCTTATAT TCAGCCAGGG 
GTCAATCAAG AAGAGGAATT ACGTCAAGCT CTAGATACCT ATAGTTCAGG ACGTTCAAAA 
CCTACTGTAC AACGTTACAA AGGTCTAGGT GAGATGGATG ACCATCAACT TTGGGAAACA 
ACAATGGATC CTGAAAACCG CTTGATGGCA CGTGTCTCAG TTGATGATGC AGCAGAAGCA 
GATAAGATTT TCGATATGCT AATGGGAGAT CGAGTAGAAC CACGACGTGA ATTCATTGAA 
GCTAATGCTG TTTATAGTAA CTTAGATATC TAG 

 

Protein sequence

MTEETKNMEQ RAQEYDASQI QVLEGLEAVR MRPGMYIGST SKEGLHHLVW EIVDNSIDEA 
LAGFAGHIKV YIEPDNSITV VDDGRGIPVD IQEKTGRPAV ETVFTVLHAG GKFGGGGYKV 
SGGLHGVGSS VVNALSTQLD VKVYKNGKVH YQEYQRGVVV NDLEIIGDTD LSGTTVHFTP 
DPEIFTETTV FDFDKLAKRI QELAFLNRGL RISISDKREG QEVEKEYHYE GGIGSYVEFI 
NENKEVIFEN PIYTDGELDG ISVEVAMQYT TGYQETVMSF ANNIHTHEGG THEQGFRTAL 
TRVINDYAKK NKILKENEDN LTGEDVREGL TAVISVKHPN PQFEGQTKTK LGNSEVVKIT 
NRLFSEAFNR FLLENPQVAK KIVEKGILAS KARIAAKRAR EVTRKKSGLE ISNLPGKLAD 
CSSNNAEMNE LFIVEGDSAG GSAKSGRNRE FQAILPIRGK ILNVEKATMD KILANEEIRS 
LFTAMGTGFG ADFDVSKVRY QKLVIMTDAD VDGAHIRTLL LTLIYRFMRP VLEAGYVYIA 
QPPIYGVKVG SEIKAYIQPG VNQEEELRQA LDTYSSGRSK PTVQRYKGLG EMDDHQLWET 
TMDPENRLMA RVSVDDAAEA DKIFDMLMGD RVEPRREFIE ANAVYSNLDI