Gene SAG0540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSAG0540 
Symbol 
ID1013343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus agalactiae 2603V/R 
KingdomBacteria 
Replicon accessionNC_004116 
Strand
Start bp555349 
End bp555624 
Gene Length276 bp 
Protein Length91 aa 
Translation table11 
GC content32% 
IMG OID637315741 
Producthypothetical protein 
Protein accessionNP_687569 
Protein GI22536718 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1605] Chorismate mutase 
TIGRFAM ID[TIGR01805] monofunctional chorismate mutase, gram positive-type, clade 2 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000524259 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTAG AAGAGATTCG TCAAGAAATA GATGAAATAG ATCAGCAATT AGTAAGCCTT 
TTAGAAACTA GAATGGGTCT AATTTTAGAG GTCATAGCAT TTAAAAAGAA ACATCGACTT
CCAGTTTTAG ATAATAATCG TGAAAACGAA GTGCTTAACA ATGTATTGAA GAAAGTCCAA
AACCATCAAT TTGACGATGT GATACGAGCA ACTTTCAAAG ACATTATGAC AGAATCTCGT
GTTTATCAAA AGGAGAATAT TGTAGACGGT GATTAA
 
Protein sequence
MELEEIRQEI DEIDQQLVSL LETRMGLILE VIAFKKKHRL PVLDNNRENE VLNNVLKKVQ 
NHQFDDVIRA TFKDIMTESR VYQKENIVDG D