Gene SAG0473 details

Gene Information

• Locus tag: SAG0473
• ID: 1013276
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Streptococcus agalactiae 2603V/R
• Kingdom: Bacteria
• Replicon accession: NC_004116
• Strand: +
• Start bp: 485763
• End bp: 487604
• Gene Length: 1842 bp
• Protein Length: 613 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 637315675
• Product: elongation factor Tu family protein
• Protein accession: NP_687503
• Protein GI: 22536652
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1217] Predicted membrane GTPase involved in stress response
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR01394] GTP-binding protein TypA/BipA

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAAATT TAAGAACAGA TATCCGTAAC GTTGCGATCA TTGCCCACGT TGACCACGGT 
AAAACAACTC TCGTTGATGA ATTATTAAAA CAATCACATA CTCTTGATGA GCGTAAAGAG 
CTTGAAGAAC GTGCAATGGA TTCAAATGAT ATCGAAAAAG AACGTGGTAT CACCATTCTT 
GCAAAAAATA CAGCCGTAGC ATACAACGAT GTTCGTATCA ATATTATGGA CACACCTGGT 
CACGCGGACT TTGGTGGTGA AGTTGAGCGT ATTATGAAAA TGGTTGATGG TGTTGTTTTA 
GTCGTTGATG CCTACGAAGG AACAATGCCA CAAACACGTT TTGTTTTGAA GAAAGCTCTT 
GAACAAAACT TAATTCCAAT CGTTGTTGTA AATAAAATTG ATAAGCCGTC AGCTCGTCCA 
TCAGAGGTTG TTGATGAAGT TCTTGAACTA TTTATTGAGC TCGGTGCTGA TGATGATCAA 
CTAGATTTCC CTGTTGTTTA TGCTTCAGCT ATCAATGGAA CATCTTCAAT GTCAGATGAT 
CCTTCAGATC AAGAAAAAAC AATGGCACCG ATTTTTGATA CTATCATTGA TCACATTCCA 
GCCCCAGTTG ACAACTCGGA AGAACCACTT CAATTCCAAG TTTCTCTTCT TGATTACAAT 
GATTTTGTAG GACGTATTGG TATTGGACGT GTTTTCCGCG GGACTGTCAA AGTTGGAGAT 
CAAGTTACTC TTTCAAAACT TGATGGTACA ACTAAAAACT TCCGCGTAAC AAAACTTTTT 
GGTTTCTTTG GACTTGAACG TAAAGAAATC CAAGAGGCTA AAGCGGGTGA TTTAATCGCT 
GTTTCTGGTA TGGAAGATAT CTTCGTTGGT GAGACAGTAA CTCCGACAGA TGCTATTGAA 
CCACTACCAG TTTTACGTAT TGACGAGCCA ACACTTCAAA TGACTTTCTT GGTGAATAAT 
TCACCATTTG CAGGTCGCGA AGGTAAATGG ATTACGTCAC GTAAGGTTGA AGAACGTCTT 
TTAGCAGAAT TACAAACAGA CGTTTCTTTA CGTGTTGACC CAACAGATTC GCCAGATAAA 
TGGACGGTTT CAGGGCGTGG AGAATTACAT TTATCTATCC TTATTGAAAC AATGCGTCGT 
GAGGGATATG AACTTCAAGT ATCACGTCCA GAAGTTATCA TCAAAGAAAT TGATGGTGTT 
CAATGCGAGC CGTTTGAGCG TGTTCAAATT GATACTCCAG AAGAATATCA GGGTGCTATT 
ATCCAAAGTT TGTCAGAGCG TAAAGGTGAT ATGCTTGATA TGCAGATGGT TGGTAATGGT 
CAAACGCGTT TGATTTTCTT GATTCCTGCA CGTGGTTTGA TTGGTTATTC AACAGAGTTT 
CTTTCAATGA CACGTGGATA TGGTATCATG AATCATACTT TTGACCAGTA TCTACCGGTT 
GTTCAAGGAG AAATTGGTGG TCGTCATCGT GGTGCCTTGG TTTCTATTGA AAATGGTAAA 
GCAACTACAT ATTCAATTAT GCGTATTGAA GAACGTGGGA CTATCTTTGT AAATCCAGGT 
ATAGAAGTTT ATGAAGGAAT GATTGTTGGT GAGAATTCTC GTGATAATGA CCTCGGAGTC 
AATATTACAA CTGCTAAACA AATGACAAAT GTCCGTTCAG CAACTAAAGA TCAAACTGCA 
GTCATCAAGA CGCCTCGTAT CCTTACTTTA GAAGAGTCAC TTGAATTTTT AGCAGATGAT 
GAGTACATGG AAGTAACTCC TGAGTCTATT CGTCTTCGTA AACAAATTTT AAATAAAGCA 
GCACGTGACA AAGCTAATAA AAAGAAAAAA TCAGCTGAAT AA 

 

Protein sequence

MTNLRTDIRN VAIIAHVDHG KTTLVDELLK QSHTLDERKE LEERAMDSND IEKERGITIL 
AKNTAVAYND VRINIMDTPG HADFGGEVER IMKMVDGVVL VVDAYEGTMP QTRFVLKKAL 
EQNLIPIVVV NKIDKPSARP SEVVDEVLEL FIELGADDDQ LDFPVVYASA INGTSSMSDD 
PSDQEKTMAP IFDTIIDHIP APVDNSEEPL QFQVSLLDYN DFVGRIGIGR VFRGTVKVGD 
QVTLSKLDGT TKNFRVTKLF GFFGLERKEI QEAKAGDLIA VSGMEDIFVG ETVTPTDAIE 
PLPVLRIDEP TLQMTFLVNN SPFAGREGKW ITSRKVEERL LAELQTDVSL RVDPTDSPDK 
WTVSGRGELH LSILIETMRR EGYELQVSRP EVIIKEIDGV QCEPFERVQI DTPEEYQGAI 
IQSLSERKGD MLDMQMVGNG QTRLIFLIPA RGLIGYSTEF LSMTRGYGIM NHTFDQYLPV 
VQGEIGGRHR GALVSIENGK ATTYSIMRIE ERGTIFVNPG IEVYEGMIVG ENSRDNDLGV 
NITTAKQMTN VRSATKDQTA VIKTPRILTL EESLEFLADD EYMEVTPESI RLRKQILNKA 
ARDKANKKKK SAE